DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8249 and TMT3

DIOPT Version :9

Sequence 1:NP_001246349.1 Gene:CG8249 / 36742 FlyBaseID:FBgn0034045 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001190054.1 Gene:TMT3 / 824312 AraportID:AT3G51490 Length:737 Species:Arabidopsis thaliana


Alignment Length:771 Identity:134/771 - (17%)
Similarity:228/771 - (29%) Gaps:346/771 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VRRQVIAVILANVGVFSTGMTLAMPTATLHQLKDTTEPVHLNDSQ--ASWFASVNALSAPIGGLL 104
            :|..|:..:.|.:|....|...|.....:..:|   :..||....  .....:::.:.|.:....
plant     1 MRSVVLVALAAAIGNMLQGWDNATIAGAVIYIK---KEFHLEKEPKIEGLIVAMSLIGATLITTF 62

  Fly   105 SGFLLDRIGRKKSLIVLNVLIILAWILLATPSESDQNAFFWQ-----LIVSRFMLGVGMGLASAP 164
            ||.:.|::||:..||:.:||..|:.|::           ||.     |:.:|.:.|.|:|||...
plant    63 SGPVSDKVGRRSMLILSSVLYFLSSIVM-----------FWSPNVYVLLFARLLDGFGIGLAVTL 116

  Fly   165 PGVYAAEISVPKTRGSLILGTSISVAGGITILYGI--GYCIRD--DFRL----IALICCGYQLVA 221
            ..:|.:|.:..:.||.|........:||:.:.|.:  |..:::  .:||    :::....|.::|
plant   117 VPIYISETAPSEIRGLLNTFPQFCGSGGMFLSYCLVFGMSLQESPSWRLMLGVLSIPSIAYFVLA 181

  Fly   222 LLCVLPLPESHCWLLSKKRVTEAKRSLNYFRG--------------------------------- 253
            ...   ||||..||:||.|:.||::.|...||                                 
plant   182 AFF---LPESPRWLVSKGRMDEARQVLQRLRGREDVSGELALLVEGLGVGKDTSIEEYVIGPDNE 243

  Fly   254 ----------------------------------------------------------------- 253
                                                                             
plant   244 ENEGGNELPRKDQIKLYGPEDGQSWMAKPVKGQSSLALASRQGSMLPRGGSLMDPLVTLFGSIHE 308

  Fly   254 ----------------------------------------------FNKSDEITHPQVLEE---- 268
                                                          .|.:..:..||..|.    
plant   309 NLPSENMNASSRSMLFPNMGSILGMMGRQESQWDPERNNEDSSDQDENLNSPLLSPQTTEPDDYH 373

  Fly   269 -------------------------------FQL------------------LQKSLQQRNTA-- 282
                                           :||                  ||:......||  
plant   374 QRTVGTMHRRQSSLFMANVGETATATSIGGGWQLAWKYNDKVGADGKRVNGGLQRMYIHEETANN 438

  Fly   283 -------------------------------------------------------VKES-FWRNL 291
                                                                   ||:. .||.|
plant   439 NTNNIPFSRRGSLLSFHPEGDGHDQVNGYVQAAALVSQASMMPGGKGETAMLPKEVKDGPGWREL 503

  Fly   292 HEPEVYKPLVILMSLFAFQQLTGIFVVIVFAVQISQEAGIEIDPFMCAVLIGL------ARLITT 350
            .||.|.:.|::.:.|...||..||..|:.:..||.:|.|:.      ::|..|      |.|:.:
plant   504 KEPGVKRALMVGVGLQILQQFAGINGVMYYTPQILEETGVS------SLLTNLGISAESASLLIS 562

  Fly   351 CPMGYILEWWGRRRAGIISTLGMSVCMFL------LAGHSQIEILKEVPYL---PVVAIVGFIV- 405
            .                ::||.|..|:.:      :.|...: :|..:|.|   .|..::|.:| 
plant   563 A----------------LTTLLMLPCILVSMRLMDVTGRRSL-MLSTIPILILSLVTLVIGSLVN 610

  Fly   406 --------LST-----------LGLYTLPFFMISELFPQKVRGPASGLTVAVGMFISFVVLKTYP 451
                    :||           :|...:|..:.||:||..|||....:..........:|..|.|
plant   611 LGGSINALISTASVTVYLSCFVMGFGAIPNILCSEIFPTSVRGLCITICALTFWICDIIVTYTLP 675

  Fly   452 GIKEYLGMSNCFIIFGVMALFALIFVYLALPETRRRTLLEIEEQFRSGRSKSQNQA 507
            .:.:.:|::..|.|:.::...|.:||||.:|||:...|..|.|.|..| :|.|:.|
plant   676 VMLKSIGIAGVFGIYAIVCAVAWVFVYLKVPETKGMPLEVISEFFSVG-AKQQDAA 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8249NP_001246349.1 MFS 49..479 CDD:119392 119/734 (16%)
Sugar_tr 60..496 CDD:278511 125/740 (17%)
TMT3NP_001190054.1 MFS 9..>186 CDD:119392 41/193 (21%)
MFS <512..703 CDD:119392 46/213 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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