DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8249 and AT3G05400

DIOPT Version :9

Sequence 1:NP_001246349.1 Gene:CG8249 / 36742 FlyBaseID:FBgn0034045 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_187191.2 Gene:AT3G05400 / 819704 AraportID:AT3G05400 Length:462 Species:Arabidopsis thaliana


Alignment Length:452 Identity:116/452 - (25%)
Similarity:202/452 - (44%) Gaps:42/452 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 FSTGMTLAMPTATLHQLKDTTEPVHLNDSQASWFASVNALSAPIGGLLSGFLLDRIGRKKSLIVL 121
            |:.|..:.....|:..:....:   |:.:|.|.|.|::.....||.:.|.......|.|.:|.|.
plant    38 FTFGAAIGYTADTMSSIMSDLD---LSLAQFSLFGSLSTFGGMIGAIFSAKAASAFGHKMTLWVA 99

  Fly   122 NVLIILAWILLATPSESDQNAFFWQLIVSRFMLGVGMGLASAPPGVYAAEISVPKTRGSLILGTS 186
            ::..|..|:.::...:     ..| |.:.||::|:|:||.|....||.|||:....||:......
plant   100 DLFCITGWLAISLAKD-----IIW-LDMGRFLVGIGVGLISYVVPVYIAEITPKHVRGAFTFSNQ 158

  Fly   187 ISVAGGITILYGIGYCIRDDFRLIAL---ICCGYQLVALLCVLPLPESHCWLLSKKRVTEAKRSL 248
            :....|:.::|..|..:  .:|.:|:   |.|..|::.|..:   |||..||..|.|..|.:..|
plant   159 LLQNCGVAVVYYFGNFL--SWRTLAIIGSIPCWIQVIGLFFI---PESPRWLAKKGRDKECEEVL 218

  Fly   249 NYFRGFNKSDEITHPQVLEEFQLLQKSLQQRNTAVKESFWRNLHEPEVYKPLVILMSLFAFQQLT 313
            ...|| .|.|.:  |:..|....::.|.:..|..:     |:|.|......|.|.:.|...|||.
plant   219 QKLRG-RKYDIV--PEACEIKISVEASKKNSNINI-----RSLFEKRYAHQLTIGIGLMLLQQLC 275

  Fly   314 GIFVVIVFAVQISQEAGIEIDPFMCAVLIGLARLITTCPMGYIL-EWWGRRRAGIISTLGMSV-C 376
            |...:..:...:.:.||.   |....:::....::....||.|| :.||||...:.|.||:.: |
plant   276 GTAGISSYGSTLFKLAGF---PARIGMMVLSLIVVPKSLMGLILVDRWGRRPLLMTSALGLCLSC 337

  Fly   377 MFLLAGHSQIEILKEVPYL----PV---VAIVGFIVLSTLGLYTLPFFMISELFPQKVRGPASGL 434
            :.|.....    :|:||.:    |:   :.|:.|.::..:|:..||:.::||:||..::..|..|
plant   338 ITLAVAFG----VKDVPGIGKITPIFCFIGILSFTMMFAIGMGALPWIIMSEIFPMDIKVLAGSL 398

  Fly   435 TVAVGMFISFVVLKTYPGIKEYLGMSNCFIIFGVMALFALIFVYLALPETRRRTLLEIEEQF 496
            ......|..::....:..:..: ..|..|||..::....::|.:..:|||||.||.||:..|
plant   399 VTIANWFTGWIANYAFNFMLVW-SPSGTFIISAIICGATIVFTWCLVPETRRLTLEEIQLSF 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8249NP_001246349.1 MFS 49..479 CDD:119392 106/433 (24%)
Sugar_tr 60..496 CDD:278511 114/447 (26%)
AT3G05400NP_187191.2 Sugar_tr 30..459 CDD:278511 115/450 (26%)
MFS 30..444 CDD:119392 106/435 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.