DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8249 and CG42825

DIOPT Version :9

Sequence 1:NP_001246349.1 Gene:CG8249 / 36742 FlyBaseID:FBgn0034045 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_729590.1 Gene:CG42825 / 39179 FlyBaseID:FBgn0262007 Length:518 Species:Drosophila melanogaster


Alignment Length:535 Identity:118/535 - (22%)
Similarity:212/535 - (39%) Gaps:117/535 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SESNGKQARIVSGLDRLLKTPPPG---EQTRAVRRQVIAVILANVGVFSTGMTLAMPTATLHQLK 74
            :|:.|.|...:...|...:..|||   ::.:..:.|..||..|.:...|.||.:|....      
  Fly    42 AETYGPQPPPMPPRDPHTRVDPPGGCFQRNQKNKPQSNAVGAAGLIFISGGMNIAWAIG------ 100

  Fly    75 DTTEPVHLNDSQ---ASWFASVNALSAPIGGLLSGFLLDRIGRKKSLIVLNVLIILAWILLATPS 136
             ...|::...::   .:||     :.|.||.|::..|.:::.:|..|...:||:.:..:::|...
  Fly   101 -FQGPIYYQTTKHNYIAWF-----IGAIIGALVTMALTNKVAKKYILQFSSVLVTVGGLVIACTH 159

  Fly   137 ESDQNAFFWQLIVSRFMLGVGMGLASAPPGVYAAEISVPKTRG-------SLILGTSI------- 187
            .:....     ..:.::.|:..||..||......|||||..||       .|..||.|       
  Fly   160 NNGAGT-----TAACYLDGIANGLVFAPFMALVGEISVPYLRGKASATLEQLCFGTGILLQILYV 219

  Fly   188 -----------------SVAGGITILYGIGYCIRDDFRLIALICCGYQLVALLCVLPLPESHCWL 235
                             ::.|.::.:||:          :|||...:..:         ||...:
  Fly   220 SNWTYSSYMTYNDFTSENMKGVLSTIYGV----------LALIMGSFFTI---------ESPVLM 265

  Fly   236 LSKKRVTEAKRSLNYFRGFNKSDEITHPQVL--EEFQLLQKSLQ----QRNTAVKESFWRNLHEP 294
            |:.   .|.:.:::..|...|      |.||  |.::||.:..:    .:|.:..||..:.|   
  Fly   266 LAN---NEEQAAIDALRRLQK------PAVLTEETYELLAEHKRYLAYNKNMSKSESISKAL--- 318

  Fly   295 EVYKPLVILMSLFAFQQLTGIFVVIVFAVQISQEAGIEIDPFMCAVLIGLA--RLITTCPMGYIL 357
            ..:..|..|.:|.|....:.:.:..|.|:.:|.:.......:     ||||  |.:.:....:.:
  Fly   319 PTFMRLAYLRALNAMSISSFVIITYVVAILVSNDLRNASSWY-----IGLAFCRWLGSLIPSFCM 378

  Fly   358 EWWGRRRA---GIISTLGMSVCMFLLAGHSQIEILKEVPYLPVVAIVGFIVLSTLGL-YTLPFFM 418
            |..||::.   |::.:.|:|     .|..||..:   ..|:..|.::..|.....|: ::.....
  Fly   379 ESLGRKKPAVFGLLVSCGLS-----FAVGSQYNV---YTYMSQVTVLIMIFEFFAGMAFSSNSAY 435

  Fly   419 ISELFPQKVRGPASGLTVAVGMFISFVVLKTYPGIKEY-LGMS-NCFIIFGVMALFALIFVYLAL 481
            ::|.:|..|:....|||....:|:..::     .:.:: .|.. |.|.|.|.|.|..:|...|.|
  Fly   436 LTEAYPMGVKQHFIGLTFITEIFVFLII-----NVCDFNFGQGYNYFYIMGAMYLAGVILGVLTL 495

  Fly   482 PETRRRTLLEIEEQF 496
            |||||.||...:|||
  Fly   496 PETRRMTLQGAQEQF 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8249NP_001246349.1 MFS 49..479 CDD:119392 97/477 (20%)
Sugar_tr 60..496 CDD:278511 104/483 (22%)
CG42825NP_729590.1 MFS 116..490 CDD:119392 89/432 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444568
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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