DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8249 and ght3

DIOPT Version :9

Sequence 1:NP_001246349.1 Gene:CG8249 / 36742 FlyBaseID:FBgn0034045 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_592790.1 Gene:ght3 / 2541758 PomBaseID:SPAC1F8.01 Length:555 Species:Schizosaccharomyces pombe


Alignment Length:493 Identity:115/493 - (23%)
Similarity:206/493 - (41%) Gaps:85/493 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 DTTEPVHLNDSQASW-----FASVNALSAPIGGLLSGFLLDRIGRKKSLIVLNVLIILAWILLAT 134
            |...|:..:.|.::|     ..::|| ....|.:||....:|||:|.|:...:.:.|:|.:||.|
pombe    42 DRYNPISNSYSYSAWRQALLTGTINA-GCLFGAMLSSPFTERIGKKYSICFFSGVYIIAELLLVT 105

  Fly   135 PSESDQNAFFW-QLIVSRFMLGVGMG-LASAPPGVYAAEISVPKTRGSLI--------------- 182
            ...|      | |::|.:.:.|||:| |:...|| |.:|::.|:.||:::               
pombe   106 AVPS------WIQVLVGKILAGVGIGALSVLSPG-YQSEVAPPQIRGAVVATYQIFSTGAALVAA 163

  Fly   183 ---LGT-------SISVAGGITILYGIGYCIRDDFRLIALICCGYQLVALLCVLPLPESHCWLLS 237
               :||       |...:.||.:|:||            |:..|        ||.||||..:|:.
pombe   164 CINMGTHKLRKTASWRTSFGINMLWGI------------LLMVG--------VLFLPESPRYLIY 208

  Fly   238 KKRVTEAKRSLNYFRGFNKSDEITHPQVLEEFQLLQKSLQQRNTAVK----ESFWRNLHEPEVYK 298
            |.|..||.|.:......:...||    :...|..::..::......|    |.|.:::.......
pombe   209 KGRDEEALRIMCNMAELSPESEI----IQTNFNTIKSDIEIEMAGGKARWIEIFGKDIRYRTCLG 269

  Fly   299 PLVILMSLFAFQQLTGIFVVIVFAVQISQEAGIEIDPFMCAVLIGLARLITTCPMGYILEWWGRR 363
            .||:|     |::|.|......:|.|:.:..|: .|.|:.||::|.....||....|.::..|||
pombe   270 FLVML-----FRELIGNNYYFYYATQVFKGTGM-TDIFLPAVILGAINFGTTFGALYTIDNLGRR 328

  Fly   364 RAGIISTLGMSVCMFLLAGHSQIEILKEVPYLPVVAIVGFIVLSTLGLYT-------LPFFMISE 421
            ...|......|:|.|:.|.....:::.:.......|....||.|.|.|::       :.:.::.|
pombe   329 NPLIFGAAFQSICFFIYAAVGDRKLIYKNGTSDHRAGSVMIVFSCLFLFSYCCSWGPMGWVIVGE 393

  Fly   422 LFPQKVRGPASGLTVAVGMFISFVVLKTYPGIKEYLGMSNCFIIFGVMALFALIFVYLALPETRR 486
            .||.:.|...:.:..:.....:|::....|.|...:|....: |:..:.||:...::....||:.
pombe   394 TFPIRYRSKCASVATSGNWLGNFMISFFTPFINNAIGFKLGY-IYACINLFSSFMIFFLAKETKG 457

  Fly   487 RTLLEIEEQFRSGRSKSQNQ---ADVEMKEVFVRKPEE 521
            .||.|:.:.:.|.....::.   .::|...:...|.||
pombe   458 LTLEEVNDLYMSNIKPWESYKYVREIESHRIHFSKEEE 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8249NP_001246349.1 MFS 49..479 CDD:119392 105/446 (24%)
Sugar_tr 60..496 CDD:278511 110/463 (24%)
ght3NP_592790.1 Sugar_tr 9..467 CDD:278511 110/463 (24%)
MFS 10..452 CDD:119392 105/448 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
TreeFam 00.000 Not matched by this tool.
21.900

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