DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8249 and ght2

DIOPT Version :9

Sequence 1:NP_001246349.1 Gene:CG8249 / 36742 FlyBaseID:FBgn0034045 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_596425.1 Gene:ght2 / 2539977 PomBaseID:SPBC4B4.08 Length:531 Species:Schizosaccharomyces pombe


Alignment Length:454 Identity:106/454 - (23%)
Similarity:194/454 - (42%) Gaps:64/454 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 TEPVHLNDSQASWFASVNALSAPIGGLLSGFLLDRIGRKKSLIVLNVLIILAWILLATPSESDQN 141
            |:...|:.::......:..:.:..|.::|..:.||.|::.|:|....:.|:..|:..|...|   
pombe    52 TDQYSLSSARQGLLTGMVNVGSLFGCIISSPIADRFGKRLSIIGFCAVYIIGIIVQVTAVPS--- 113

  Fly   142 AFFW-QLIVSRFMLGVGMG-LASAPPGVYAAEISVPKTRGSLILGTSISVAGGITILYGIGYCIR 204
               | |::|::...|:|:| |:...|| |.:|.:.|..||::::...:.|.|||.    |..||.
pombe   114 ---WVQIMVAKIWTGIGIGALSVLAPG-YQSETAPPSIRGTVVVTYQLFVTGGIF----IAACIN 170

  Fly   205 ---------DDFRLIALICCGYQLVALLCVLPLPESHCWLLSKKRVTEAKRSLNYFRGFNKSDEI 260
                     ..:|:...|...:.::.::.:|.||||..:|:...:..||.|.|      ::|.|:
pombe   171 MGTHKLHKTAQWRVSIGINLLWGIITMIGILFLPESPRYLIQVGKDEEAVRVL------SESAEL 229

  Fly   261 --THPQVLEEFQLLQKSLQQRNTAVKESF------WRNLHEPEVYKPLVILMSLFAFQQLTGIFV 317
              ...:|..|:..|:.|       :.|.|      |.::...::.....:.|.:.:.|||||...
pombe   230 FPDSEEVQNEYHRLKSS-------IDEEFAGGPCSWASIFGKDIRYRTFLGMFVMSLQQLTGNNY 287

  Fly   318 VIVFAVQISQEAGIEIDPFMCAVLIGLARLITTCPMG--YILEWWGRRRAGIISTLGMSVCMFLL 380
            ...:...:.|.|||. .|::.|:::.....  .|..|  |:||.:|||...||..:..|:|.|:.
pombe   288 FFYYGFSVMQGAGIN-SPYLSAMILDAVNF--GCTFGGMYVLERFGRRNPLIIGGIWQSICFFIY 349

  Fly   381 A-----------GHSQIEILKEVPYLPVVAIVGFIVLSTLGLYTLPFFMISELFPQKVRGPASGL 434
            :           |.|.......:..:..:.|.||........|.:    :.|.:|.:.|...:.:
pombe   350 SAVGSRALYHKNGTSNTRAGAVMIVMACLFIFGFAQTWAPAAYVI----VGESYPVRYRSKCAAV 410

  Fly   435 TVAVGMFISFVVLKTYPGIKEYLGMSNCFIIFGVMALFALIFVYLALPETRRRTLLEIEEQFRS 498
            ..|.....:|::....|.|:..:|....: :|....|...|.::|...||:..||.||.|.:.|
pombe   411 ATASNWLWNFLISFFTPFIQASIGFKYGY-VFASCNLTGAIVIFLFAKETKGLTLEEINELYMS 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8249NP_001246349.1 MFS 49..479 CDD:119392 97/433 (22%)
Sugar_tr 60..496 CDD:278511 105/450 (23%)
ght2NP_596425.1 MFS 14..456 CDD:119392 98/435 (23%)
Sugar_tr 15..471 CDD:278511 105/450 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
TreeFam 00.000 Not matched by this tool.
21.900

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