DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8249 and srx-118

DIOPT Version :9

Sequence 1:NP_001246349.1 Gene:CG8249 / 36742 FlyBaseID:FBgn0034045 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_496675.2 Gene:srx-118 / 188681 WormBaseID:WBGene00006009 Length:328 Species:Caenorhabditis elegans


Alignment Length:178 Identity:37/178 - (20%)
Similarity:69/178 - (38%) Gaps:41/178 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 VLEEFQLLQKSLQQRNTAVKESFWRNLHEPEVYKPLVILMSLFAFQQLTGIFVVIVFAVQISQEA 329
            ||:||...:.|.....|              |...::|::|:........||:...|.| ..::.
 Worm     4 VLDEFLYSEFSTPSTRT--------------VSAVMLIVVSIIGSIMNVLIFIATFFRV-TKRDG 53

  Fly   330 GIEIDPF----MCAVLIG-----LARLITTCP--------MGYILEWWGRRRAGIISTLGMSVCM 377
            .::|..|    .|.|.||     :..|:...|        ||..:.|:| ...|.:|.:.::|..
 Worm    54 FLKICCFNSFGSCIVCIGYLAFPVPSLLLEDPPNHWLNAAMGQFIAWFG-WSIGPLSQILLTVNR 117

  Fly   378 FLLAGHSQIEILKEVPYLPVVAIVGFIVLSTLGLYTLPFFMISELFPQ 425
             ::|.:..:..:|:..|.|....:||       .:.:.|.::...||:
 Worm   118 -IIAVYFPLLYMKKYRYNPTNVGIGF-------SFFVAFILLVSFFPE 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8249NP_001246349.1 MFS 49..479 CDD:119392 37/178 (21%)
Sugar_tr 60..496 CDD:278511 37/178 (21%)
srx-118NP_496675.2 7TM_GPCR_Srx 27..285 CDD:370981 30/141 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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