DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8249 and hmit-1.1

DIOPT Version :9

Sequence 1:NP_001246349.1 Gene:CG8249 / 36742 FlyBaseID:FBgn0034045 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_507623.1 Gene:hmit-1.1 / 180205 WormBaseID:WBGene00013073 Length:606 Species:Caenorhabditis elegans


Alignment Length:603 Identity:126/603 - (20%)
Similarity:220/603 - (36%) Gaps:143/603 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SGLDRLLKTPPPGEQTRAVRRQVIAVILAN---VGVFSTGMTLAMPTATLHQLKDTTEPVHLNDS 85
            ||.|:...||..|         :...|||.   :|.|..|...::.:|.:..:.|..   .|...
 Worm    10 SGQDKPAHTPKLG---------LFVYILAAASVIGGFLFGYDTSVVSAAMLYMPDAP---GLKPM 62

  Fly    86 QASW---FASVNALSAPIGGLLSGFLLDRIGRKKSLIVLNVLIILAWILLATPSESDQNAFFWQL 147
            ...|   ..|::...|.:|.|:||...|.|||:|.::..:.:..:..::.|    :..|..  .|
 Worm    63 DTVWQEVLVSISPGMAAVGSLMSGTSSDYIGRRKVILGASAIFTIGALVCA----ASVNKI--ML 121

  Fly   148 IVSRFMLGVGMGLASAPPGVYAAEISVPKTRGSLILGTSISVAGGITIL------------YGIG 200
            :|.|.:||:.:|.||....||..|.:....||.|:...::.::.|..:.            |.:|
 Worm   122 LVGRVLLGIAIGFASMIVPVYLGETAPTHVRGMLVAAFALMISFGQVVANITGGAFSYIDPYNVG 186

  Fly   201 YCIRDDFRLIALICCGYQLVALLCVLPLPESHCWLLSKKRVTEAKRSLNYFRGFNKSDEITHPQV 265
            :      ||:........::..:|.:.|||:..||......||.:..|.  :.:|...|....::
 Worm   187 W------RLMFAFAAVPSIIQFVCFMFLPETPRWLYENGFETETREVLE--KVYNGDKEWVEYEM 243

  Fly   266 LE--EFQLLQKSLQQRNTAVKESFWRNLHEPEVYKPLVILMSLFAFQQLTGIFVVIVFAVQISQE 328
            .|  .|...|....::..|.....||.|..|.|.|...|...|.|||||.||..::.:...|.:.
 Worm   244 AEIIAFNEDQAKENEKAHASGPVIWRILKTPHVLKACFIGSMLQAFQQLAGINTILYYTADIIRS 308

  Fly   329 AGIEID--PFMCAVLIGLARLI-TTCPMGYILEWWGRR-----RAG--IISTLGMSVCMFLLAGH 383
            :||..:  ....:||:.|...| ...||. ::|..|||     ..|  ::|.:.:.|. |||..|
 Worm   309 SGISNNHTTIWISVLLSLCNFIGPFVPMS-LIEKVGRRIIFLFSCGLVVLSLVFIGVA-FLLVNH 371

  Fly   384 SQIEILKEVPY------------------------------------------------------ 394
            .....|....|                                                      
 Worm   372 DSAATLPANQYGSNFNSSYPDAKGCMAYSNCDYCVTTDACGFCHDANTKQGYCLPAGFDNPEVYS 436

  Fly   395 -----------------------------LPVVAIVGFIVLSTLGLYTLPFFMISELFPQKVRGP 430
                                         ||::|...:::..:.|..:||:.:.||.:|...|..
 Worm   437 STGSCTNSNGSIANNFKWEKYYCDTKYTLLPIIACGVYLLTFSSGFTSLPWVLNSEFYPMWARST 501

  Fly   431 ASGLTVAVGMFISFVVLKTYPGIKEYLGMSNCFIIFGVMALFALIFVYLALPETRRRTLLEIEEQ 495
            ...::.......:.::..||..:.:.:|....|.::..:.:.|.||:...:|||:..::.|:|..
 Worm   502 CVAISTTSNWVFNLIIALTYLSLTQVIGKYGAFWLYAGLTVIAFIFILFLVPETKGYSIEEVEML 566

  Fly   496 FRSGRSKSQNQADVEMKE 513
            |.:  .|.:.:|:...:|
 Worm   567 FMN--KKQRREAESRRRE 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8249NP_001246349.1 MFS 49..479 CDD:119392 111/542 (20%)
Sugar_tr 60..496 CDD:278511 111/545 (20%)
hmit-1.1NP_507623.1 MFS_HMIT_like 31..554 CDD:340918 108/541 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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