DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8249 and C35A11.4

DIOPT Version :9

Sequence 1:NP_001246349.1 Gene:CG8249 / 36742 FlyBaseID:FBgn0034045 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_504430.2 Gene:C35A11.4 / 178921 WormBaseID:WBGene00016431 Length:515 Species:Caenorhabditis elegans


Alignment Length:483 Identity:116/483 - (24%)
Similarity:211/483 - (43%) Gaps:61/483 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 IAVILANVGVFSTGMTLAMPT----ATLHQLKDTTEP-----VHLNDSQASWFASVNALSAPIGG 102
            :|||.:..|.|..|..|.:..    |.|:.:..|...     :..|..|..|...|..|.  :|.
 Worm    12 VAVITSIAGSFHFGFNLVLTNPSQEAFLNFMNQTLAKRFDGGLSDNTLQNIWSFVVAILF--LGA 74

  Fly   103 LLSGF----LLDRIGRKKSL-IVLNVLIILAWILLATPSESDQNAFFWQLIVSRFMLG----VGM 158
            |...|    :.|.||||..| |.:.|.::...:.:|    |.....|...|.||.::|    |.:
 Worm    75 LAGSFSIRLIADWIGRKNGLYISIAVGVLAGGMSIA----SKFIPLFELYIASRIVMGWSVSVSL 135

  Fly   159 GLASAPPGVYAAEISVPKTRGS--LILGTSI---SVAGGITILYGIGYCIRDDFRLIALICCGYQ 218
            ||::    ::.:|.|..:.||:  ::.||.:   :|.|.:..:..| :...|.:.||.....|..
 Worm   136 GLSA----LFLSEASPKQNRGAIGMMTGTCVQLGTVCGSVIAMPQI-FGTEDLWWLIYATEIGIM 195

  Fly   219 LVALLCVLPLPESHCWLLSKKRVTEAKRSLNYFRGFNKSDEITH-PQVLEEFQLLQKSLQQRNTA 282
            |.....:...|||..:|:.:.....|.:|:.|:......:...| .::.||.:...|:.:..:..
 Worm   196 LFFGAALPFFPESPGFLIQRGATEAATKSIAYYYNCEIDEAEKHLNEIKEEQKNSTKNFKMMDIV 260

  Fly   283 VKESFWRNLHEPEVYKPLVILMSLFAFQQLTGIFVVIVFAVQISQEAGIEI-DPFMCAVLIGLAR 346
            .|:|    |.:    |..:.::..|| ...:|:.|:..||..|.::.|::: :..:....|.:..
 Worm   261 RKKS----LRD----KAFIGVVVTFA-MSFSGVAVINAFAFDILKDTGLKVLEASLANDAISVVS 316

  Fly   347 LITTCPMGYILEWWGRRRAGIISTLGMSVCMFLLAGHSQIEILKEVPYLPVVAIVGFIVLSTLGL 411
            :|::.....|::..|||...:||..|:.||..:      |..|....|.....::|||::..:.:
 Worm   317 MISSIVAAVIVDRNGRRPLLLISFAGILVCNLI------IFALMFTFYKFENHVLGFILICFICI 375

  Fly   412 YT---------LPFFMISELFPQKVRGPASGLTVAVGMFISFVVLKTYPGIKEYLGMSNCFIIFG 467
            :|         |.:|:.:||..|..|..|......:.|...||::..:..:|..||.:..::|..
 Worm   376 FTFFFALGPGPLCYFINAELVGQAARSAAQSWASVIQMLSRFVIVTAFLPMKNQLGEAWSYLILF 440

  Fly   468 VMALFA-LIFVYLALPETRRRTLLEIEE 494
            |..:.| |:::|.:||||:.:...|:||
 Worm   441 VAPVAASLVYLYFSLPETKNKNPFEVEE 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8249NP_001246349.1 MFS 49..479 CDD:119392 107/464 (23%)
Sugar_tr 60..496 CDD:278511 111/470 (24%)
C35A11.4NP_504430.2 MFS_GLUT_Class1_2_like 13..461 CDD:340915 113/473 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158008
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D524131at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

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