DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8249 and hmit-1.3

DIOPT Version :9

Sequence 1:NP_001246349.1 Gene:CG8249 / 36742 FlyBaseID:FBgn0034045 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_497725.2 Gene:hmit-1.3 / 175458 WormBaseID:WBGene00010811 Length:604 Species:Caenorhabditis elegans


Alignment Length:590 Identity:131/590 - (22%)
Similarity:219/590 - (37%) Gaps:179/590 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 NDSQASWFASVNALSAPIGGLLSGF--------LL------------------------------ 109
            :|.:..||..:.|.||.|||.|.|:        :|                              
 Worm    20 SDPKTGWFVYMLAFSAVIGGFLFGYDTGIVSAAMLYVPNASGIKPLDSVWQEIIVSITPGVAAIG 84

  Fly   110 --------DRIGRKKSLIVLNVLIILAWILLATPSESDQNAFFWQ---LIVSRFMLGVGMGLASA 163
                    |.:||||.:|..:|...:..|:.|..         |.   |::.|.:||:.:|.||.
 Worm    85 SLCSGPGSDFLGRKKIIIGASVTFTIGAIICAAA---------WTKIILLIGRILLGLAIGFASM 140

  Fly   164 PPGVYAAEISVPKTRGSLILGTSISVAGGITILYGIG----YCIRDD--FRLIALICCGYQLVAL 222
            ...:|.:|.|....||.|:.|..:.:..|:.|...||    |...|.  :||:........::..
 Worm   141 IVPIYVSEASPSHIRGKLVTGFQLMITVGLVIANIIGGAFSYVDPDQVGWRLMFAFAAVPAIIQF 205

  Fly   223 LCVLPLPESHCWLLSKKRVTEAKRSLNYFRGFNKSDEITHPQVLE-----EFQLLQKSLQQRN-- 280
            :|.|.||||..||....|..||:..|.  |.:|...|....::.|     |.:|..|:....|  
 Worm   206 VCFLFLPESPRWLYEHGRTVEAREVLT--RIYNGHTEWVDYEINEISFSYEEELRAKAEHAGNGP 268

  Fly   281 TAVKESFWRNLHEPEVYKPLVILMSLFAFQQLTGIFVVIVFAVQISQEAGIEIDPFMCAVLIGLA 345
            |.:     |.|..|.|.|.::|...|..||||:||..|:.:...|.:.||::.:.....:.:|.:
 Worm   269 TII-----RILKTPHVRKAMIIGSLLQMFQQLSGINTVMYYTGNIIRSAGVKDNHTTIWISVGTS 328

  Fly   346 R---LITTCPMGYILEWWGRRRAGIISTLGMSVCMFLLA-------------------------- 381
            .   |.|..|:. ::|..|||...::|.:|  |.:||:|                          
 Worm   329 AINFLGTFIPIA-LVERVGRRVLLLVSMIG--VILFLIAMGVSFLLINNDSLRTFDQQNYTLNYN 390

  Fly   382 ------------------------GHSQIEILKE---VPY------------------------- 394
                                    |..:.::.|:   :|:                         
 Worm   391 PSVKHAAKCLKYSNCDFCVTDENCGFCESKVAKKGYCLPFPSDDSSDYSATGICEFSNLTNNGTD 455

  Fly   395 --------------LPVVAIVGFIVLSTLGLYTLPFFMISELFPQKVRGPASGLTVAVGMFISFV 445
                          ||::.:|.:::..:.|...||:.:.:|.:|...|..|..::.|.....:.:
 Worm   456 FEWEDTYCHTKFTVLPIIIMVFYLLSFSAGYAPLPWVLNAEFYPLWARSTAVSVSTACNWIFNLI 520

  Fly   446 VLKTYPGIKEYLGMSNCFIIFGVMALFALIFVYLALPETRRRTLLEIEEQF--RSGRSKSQNQAD 508
            |..|:..:.:.......|.|:....:.||:||:..:|||:..::.|:|..|  :..|.|:|...|
 Worm   521 VSLTFLSLSQAATKYGTFFIYCGCTMVALVFVFFFVPETKGYSIDEVEMLFMTKEERRKAQKVLD 585

  Fly   509 VEMKE 513
             |.||
 Worm   586 -ESKE 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8249NP_001246349.1 MFS 49..479 CDD:119392 118/552 (21%)
Sugar_tr 60..496 CDD:278511 123/569 (22%)
hmit-1.3NP_497725.2 MFS 34..558 CDD:421695 114/542 (21%)
MFS <190..>249 CDD:421695 17/60 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158116
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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