DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8249 and Slc2a13

DIOPT Version :9

Sequence 1:NP_001246349.1 Gene:CG8249 / 36742 FlyBaseID:FBgn0034045 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_598295.2 Gene:Slc2a13 / 171147 RGDID:621814 Length:637 Species:Rattus norvegicus


Alignment Length:619 Identity:140/619 - (22%)
Similarity:236/619 - (38%) Gaps:151/619 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LNQNGSESNGKQARIVSGL--DRLLKTPPPG--------------------EQTRAVRRQ----- 45
            :::..||......|.:|.|  :|..:.|.||                    |..||.|||     
  Rat     1 MSRKASEDVEYTLRSLSSLMGERRRRQPEPGAPGGERSLLAAESAASLQGAELERAARRQFQRDE 65

  Fly    46 -----VIAVILANVGVF----STGMTLAMPTATLHQLKDTTEPVHLNDSQASWFASVNALSAPIG 101
                 ..|...:.:|.|    .||:..........|::.......|..|.|...|:|.||:   |
  Rat    66 TPAFVYAAAAFSALGGFLFGYDTGVVSGAMLLLRRQMRLGAMWQELLVSGAVGAAAVAALA---G 127

  Fly   102 GLLSGFLLDRIGRKKSLIVLNVLIILAWILLATPSESDQNAFFWQLIVSRFMLGVGMGLASAPPG 166
            |.|:|.|    ||:.::::.:.|..:...:||..:..:      .|:..|.::|:|:|:||....
  Rat   128 GALNGAL----GRRSAILLASALCTVGSAVLAAAANKE------TLLAGRLVVGLGIGIASMTVP 182

  Fly   167 VYAAEISVPKTRGSLILGTSISVAGG---ITILYG-IGYCIRDDFRLIALICCGYQLVALLCVLP 227
            ||.||:|.|..||.|:...::.:.||   .:::.| ..|..:|.:|.:..:.....::..|..|.
  Rat   183 VYIAEVSPPNLRGRLVTINTLFITGGQFFASVVDGAFSYLQKDGWRYMLGLAAIPAVIQFLGFLF 247

  Fly   228 LPESHCWLLSKKRVTEAKRSLNYFRGFNKSDEITHPQVLEEFQLLQKSLQQRN---TAVKESFWR 289
            ||||..||:.|.:..:|:|.|:..||....|        ||:..::.|:::..   :|......|
  Rat   248 LPESPRWLIQKGQTQKARRILSQMRGNQTID--------EEYDSIRNSIEEEEKEASAAGPIICR 304

  Fly   290 NLHEPEVYKPLVILMSLFAFQQLTGIFVVIVFAVQISQEAGIEID--PFMCAVLIGLARLITTCP 352
            .|..|...:.|.:...|..||||:||..::.::..|.|.:|:|.|  ....|.:......|.|..
  Rat   305 MLSYPPTRRALAVGCGLQMFQQLSGINTIMYYSATILQMSGVEDDRLAIWLASITAFTNFIFTLV 369

  Fly   353 MGYILEWWGRRRAGIISTLGMSVCMFLLA------------------------------------ 381
            ..:::|..|||:....|..|.:|.:.:||                                    
  Rat   370 GVWLVEKVGRRKLTFGSLAGTTVALTILALGFLLSAQVSPRVTFRPTAPSGQNATCTEYSYCNEC 434

  Fly   382 ------------------GHSQIEILK-----------------------------EVPY--LPV 397
                              ..|.:.:.|                             ..||  ..:
  Rat   435 MLDPDCGFCYKINSSAVIDSSCVPVNKASTNEAAWGRCENETKFKAEDVHWAYSFCPTPYSWTAL 499

  Fly   398 VAIVGFIVLSTLGLYTLPFFMISELFPQKVRGPASGLTVAVGMFISFVVLKTYPGIKEYLGMSNC 462
            |.:|.::|....|:..:|:.:.||::|...|...:..:..:....:.:|..|:....|||.....
  Rat   500 VGLVLYLVFFAPGMGPMPWTVNSEIYPLWARSTGNACSAGINWIFNVLVSLTFLHTAEYLTYYGA 564

  Fly   463 FIIFGVMALFALIFVYLALPETRRRTLLEIEEQF 496
            |.::...|...|:|||..||||:.:.|.|||..|
  Rat   565 FFLYAGFAAVGLLFVYGCLPETKGKKLEEIESLF 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8249NP_001246349.1 MFS 49..479 CDD:119392 114/527 (22%)
Sugar_tr 60..496 CDD:278511 120/529 (23%)
Slc2a13NP_598295.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..38 6/21 (29%)
MFS 75..580 CDD:119392 113/525 (22%)
Sugar_tr 78..598 CDD:278511 123/540 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337847
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D524131at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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