DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8249 and slc2a12

DIOPT Version :9

Sequence 1:NP_001246349.1 Gene:CG8249 / 36742 FlyBaseID:FBgn0034045 Length:521 Species:Drosophila melanogaster
Sequence 2:XP_031758281.1 Gene:slc2a12 / 100487147 XenbaseID:XB-GENE-1012136 Length:591 Species:Xenopus tropicalis


Alignment Length:586 Identity:120/586 - (20%)
Similarity:229/586 - (39%) Gaps:157/586 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 VIAVILANVGVFSTGMTLAMPTATLHQLKDTTEPVHLNDSQASWFASVNALSAPIGGLLSGFLLD 110
            :::.::|.|.....|..|.:.:..|.||:...|   |...|.....|...:.|.:..|:.|.|:|
 Frog    39 LLSSVIAAVSGLLVGYELGIISGALLQLQSLLE---LTCQQQEIVVSALLIGAFVASLVGGSLID 100

  Fly   111 RIGRKKSLIVLNVLIILAWILLATPSESDQNAFFWQLIVSRFMLGVGMGLASAPPGVYAAEISVP 175
            ..||:.::|..::|::.:.:|...      ...:..||..|.::||.:.|::....||.||||..
 Frog   101 LYGRRITIIFTSILLVFSNLLPVV------IVSYGSLIAGRIVIGVSISLSAIATCVYIAEISPQ 159

  Fly   176 KTRGSLILGTSISVAGGITILYGIGYCIRDDFRLIALICCGYQ--------LVAL--LCVLPLPE 230
            ..||.|:....:.:..||...|...|       |.|.:..|::        |.||  :.:..||:
 Frog   160 HKRGMLVSLNELMIVVGILFAYICNY-------LFASVSNGWKYMFGLIIPLAALQAIAMYFLPQ 217

  Fly   231 SHCWLLSKKRVTEAKRSLNYFRG-FNKSDEIT--HPQVLEEFQ--LLQKSLQQRNTAVKESFWRN 290
            |..:|:.|.....|.:.|...|. .|.|:|:|  ...:..|:|  .|.....:.|..|:      
 Frog   218 SPRFLIMKGYDDAAGKVLQKLRATTNISEELTAIKSSIKAEYQYRFLDLFCSRDNMRVR------ 276

  Fly   291 LHEPEVYKPLVILMSLFAFQQLTGIFVVIVFAVQISQEAGIEID--PFMCAVLIGLARLITTCPM 353
                     |:|.::|..|.|:||...::.:|..:.:..|.:..  ..:.:..||:.::::|.|.
 Frog   277 ---------LLIGLTLSFFVQITGQPNILFYASTVLKSVGFQSTEAASLASTGIGVIKVVSTIPA 332

  Fly   354 GYILEWWGRR---------------RAGII----------------------------------- 368
            ...::..|.:               ..|::                                   
 Frog   333 IIFVDKIGSKTFLCIGSAVMAVSLVSVGLVSLQLDVNFNNICKVHTMQNHSLQDSIIYGPLSLSK 397

  Fly   369 ---------STLGMSVCMFL--LAG-----------HSQIEI------LKEVP--------YLPV 397
                     |||..:...:|  |.|           .|.|.:      :|..|        :|.:
 Frog   398 PNESLFEETSTLESTKASYLSPLNGTKSWHFTTQEVDSSIGVTPKETKIKSQPDGIPEYMKWLCL 462

  Fly   398 VAIVGFIVLSTLGLYTLPFFMISELFPQKVRGPASGLTVAVGMFISFVVLKTYPGIKEYLGMSNC 462
            .:::.|:...::||..:.:.:.||:||..::|.|..:|.::...::.::..|:..:.|.:|:.  
 Frog   463 ASLLAFVAAFSIGLGPMAWLVQSEIFPAGIKGRAFAITSSMNWGMNLLISLTFLTLTEIIGLP-- 525

  Fly   463 FIIFG--VMALFALIFVYLALPETRRRTLLEIEEQF-------------RSGRSK------SQNQ 506
            :::||  :|::.:|:||.:.:|.|:.|.|.||..:.             |.|:.|      .||.
 Frog   526 WMLFGYALMSIASLVFVIMFVPNTKGRPLEEISMELANRSYVCNAVCYSRRGKRKLTPMALIQNS 590

  Fly   507 A 507
            |
 Frog   591 A 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8249NP_001246349.1 MFS 49..479 CDD:119392 108/534 (20%)
Sugar_tr 60..496 CDD:278511 112/540 (21%)
slc2a12XP_031758281.1 MFS_GLUT12_Class3 40..557 CDD:340993 112/549 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.