DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxn and SDCBP

DIOPT Version :9

Sequence 1:NP_001261016.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001335270.1 Gene:SDCBP / 6386 HGNCID:10662 Length:319 Species:Homo sapiens


Alignment Length:120 Identity:26/120 - (21%)
Similarity:47/120 - (39%) Gaps:32/120 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VNGRPLPD--CVRRRIVDLALCGVRPCDIS-RQLLVSHGCVSKILTRFYETGSIRPGSIGGSKTK 78
            |:|.||..  ..|...::..:..|...|:. |:..:..|....||.:..:      |.||     
Human    94 VSGAPLQGQLVARPSSINYMVAPVTGNDVGIRRAEIKQGIREVILCKDQD------GKIG----- 147

  Fly    79 QVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSVPSISSINRILRNSG 133
                       :|||..::|:|.     ||.|..  .|:|:..:...:::|:.:|
Human   148 -----------LRLKSIDNGIFV-----QLVQAN--SPASLVGLRFGDQVLQING 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxnNP_001261016.1 HTH 5..133 CDD:304362 25/118 (21%)
SDCBPNP_001335270.1 PDZ_signaling 133..212 CDD:238492 17/81 (21%)
PDZ_signaling 217..290 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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