DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxn and PAX6

DIOPT Version :10

Sequence 1:NP_476686.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001355839.1 Gene:PAX6 / 5080 HGNCID:8620 Length:503 Species:Homo sapiens


Alignment Length:144 Identity:87/144 - (60%)
Similarity:106/144 - (73%) Gaps:8/144 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GQAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTRFYETGSIRP 69
            |.:|||||||||||||||||..|::||:||..|.|||||||.|.||:|||||||.|:||||||||
Human    85 GHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRP 149

  Fly    70 GSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSVPSISSINRILRNSGL 134
            .:|||||.: ||||.||.||.:.|.|...:||||||::|..:.||...::||:|||||:|||   
Human   150 RAIGGSKPR-VATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRN--- 210

  Fly   135 WTDEMTSSQQNAAA 148
                :.|.:|...|
Human   211 ----LASEKQQMGA 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxnNP_476686.1 HTH_ARSR 5..133 CDD:481197 84/127 (66%)
PAX6NP_001355839.1 PAX 85..209 CDD:128645 81/124 (65%)
Homeodomain 293..348 CDD:459649
Blue background indicates that the domain is not in the aligned region.

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