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Protein Alignment Poxn and PAX6
DIOPT Version :9
| Sequence 1: | NP_001261016.1 |
Gene: | Poxn / 36741 |
FlyBaseID: | FBgn0003130 |
Length: | 425 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001355839.1 |
Gene: | PAX6 / 5080 |
HGNCID: | 8620 |
Length: | 503 |
Species: | Homo sapiens |
| Alignment Length: | 144 |
Identity: | 87/144 - (60%) |
| Similarity: | 106/144 - (73%) |
Gaps: | 8/144 - (5%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 5 GQAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTRFYETGSIRP 69
|.:|||||||||||||||||..|::||:||..|.|||||||.|.||:|||||||.|:||||||||
Human 85 GHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRP 149
Fly 70 GSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSVPSISSINRILRNSGL 134
.:|||||.: ||||.||.||.:.|.|...:||||||::|..:.||...::||:|||||:|||
Human 150 RAIGGSKPR-VATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRN--- 210
Fly 135 WTDEMTSSQQNAAA 148
:.|.:|...|
Human 211 ----LASEKQQMGA 220
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Poxn | NP_001261016.1 |
HTH |
5..133 |
CDD:304362 |
84/127 (66%) |
| PAX6 | NP_001355839.1 |
PAX |
85..209 |
CDD:128645 |
81/124 (65%) |
| Homeobox |
295..348 |
CDD:395001 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0849 |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| Isobase |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
0 | 0.000 |
Not matched by this tool. |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
0 | 0.000 |
Not matched by this tool. |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
| User_Submission |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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