DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxn and PAX4

DIOPT Version :9

Sequence 1:NP_001261016.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001353039.1 Gene:PAX4 / 5078 HGNCID:8618 Length:351 Species:Homo sapiens


Alignment Length:363 Identity:114/363 - (31%)
Similarity:153/363 - (42%) Gaps:108/363 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPHTGQAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTRFYETG 65
            |...|.:.:|||||:||||||||...|::||.||:.|:|||||||.|.||:|||||||.|:|.||
Human     1 MHQDGISSMNQLGGLFVNGRPLPLDTRQQIVRLAVSGMRPCDISRILKVSNGCVSKILGRYYRTG 65

  Fly    66 SIRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSVPSISSINRILR 130
            .:.|..|||||.: :|||.||.:|.:||.|...:|||||:.||..:.:|.....||:|||||:||
Human    66 VLEPKGIGGSKPR-LATPPVVARIAQLKGECPALFAWEIQRQLCAEGLCTQDKTPSVSSINRVLR 129

  Fly   131 NSGLWTDE-MTSSQQNAAAAAAAAAAAAHQA-----GSGPSNGY-------------------GG 170
              .|..|: :..::..:.|..|.|....|..     |:.|..|:                   .|
Human   130 --ALQEDQGLPCTRLRSPAVLAPAVLTPHSGSETPRGTHPGTGHRNRTIFSPSQAEALEKEFQRG 192

  Fly   171 QAP------------------------------------------------------PPPVTVAP 181
            |.|                                                      .|.:..|.
Human   193 QYPDSVARGKLATATSLPEDTVRVWFSNRRAKWRRQEKLKWEMQLPGASQGLTVPRVAPGIISAQ 257

  Fly   182 PTPAATPSIARYAKPP------ALMMNSAGEMPIKPAPK---MPPSMGHGHSHGLNPNVSGLDLS 237
            .:|.:.|:.|..|..|      .|...:|.|..:...|.   :.|..||     |.|..:.||..
Human   258 QSPGSVPTAALPALEPLGPSCYQLCWATAPERCLSDTPPKACLKPCWGH-----LPPQPNSLDSG 317

  Fly   238 YSALHKHWLWNPSLLYYTQAHIQAQAAASGGQFLPYAG 275
            ...|.     .||    :..|:   |:.||.|.|.:.|
Human   318 LLCLP-----CPS----SHCHL---ASLSGSQALLWPG 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxnNP_001261016.1 HTH 5..133 CDD:304362 73/127 (57%)
PAX4NP_001353039.1 PAX 5..129 CDD:128645 71/124 (57%)
Homeobox 174..226 CDD:306543 3/51 (6%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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