DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Poxn and PAX3

DIOPT Version :9

Sequence 1:NP_001261016.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_852124.1 Gene:PAX3 / 5077 HGNCID:8617 Length:505 Species:Homo sapiens


Alignment Length:420 Identity:136/420 - (32%)
Similarity:186/420 - (44%) Gaps:106/420 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GQAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTRFYETGSIRP 69
            ||..||||||||:||||||:.:|.:||::|..|:|||.|||||.||||||||||.|:.|||||||
Human    34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRP 98

  Fly    70 GSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSVPSISSINRILRNS-G 133
            |:|||||.|||.||.|.|||...|.||.|||:||||::|.:..|||.::|||:|||:||||:. |
Human    99 GAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFG 163

  Fly   134 LWTDEMTSSQQNAAAAAAAAA-----AAAHQAGSGPSNGYGGQAPPPPVTVAPPTPAATPSIARY 193
            ...:|....::..|..:...|     ....:..|.|.:..|..                      
Human   164 KGEEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSD---------------------- 206

  Fly   194 AKPPALMMNSAGEMPIKPAPKMPPSMGHGHSHGLNPNVSGLDLSYSALHKHWLWNPSLL----YY 254
                   ::|..::|:|...:      ...:......:..|:.::...|...::....|    ..
Human   207 -------IDSEPDLPLKRKQR------RSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKL 258

  Fly   255 TQAHIQA---------QAAASGGQFLPY----AGGYLPHAMAAAAASSTSALGGFTKSESSIDLS 306
            |:|.:|.         :..|...|.:.:    .||:.|.||        ..|..:..||:|..  
Human   259 TEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAM--------PTLPTYQLSETSYQ-- 313

  Fly   307 TPGAAGDALSDCDSGKSSPAALSLTASGGGNGAGSAPEASPGSTLSHSR-KRNPYSIEELLKKPE 370
             |.:...|:||..|....|..|                  |.||:..|. ..||           
Human   314 -PTSIPQAVSDPSSTVHRPQPL------------------PPSTVHQSTIPSNP----------- 348

  Fly   371 KRLRLDSNRLECLESS--SCESSQDSPVAP 398
                 ||:...||.|:  ...|..||.|.|
Human   349 -----DSSSAYCLPSTRHGFSSYTDSFVPP 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxnNP_001261016.1 HTH 5..133 CDD:304362 86/128 (67%)
PAX3NP_852124.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
PAX 34..159 CDD:128645 84/124 (68%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 37..93 38/55 (69%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 113..161 28/47 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..228 9/97 (9%)
Homeobox 222..276 CDD:395001 6/53 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..351 16/78 (21%)
Pax7 347..391 CDD:403540 12/43 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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