DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxn and sv

DIOPT Version :9

Sequence 1:NP_001261016.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster


Alignment Length:495 Identity:160/495 - (32%)
Similarity:206/495 - (41%) Gaps:102/495 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GQAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTRFYETGSIRP 69
            |..|||||||||||||||||.||:|||:||..|||||||||||.||||||||||:|:|||||.:.
  Fly   175 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRYYETGSFKA 239

  Fly    70 GSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSVPSISSINRILRNSGL 134
            |.|||||.| ||||.||..|...|.||..|||||||::|..:.:|...:|||:||||||:||.  
  Fly   240 GVIGGSKPK-VATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVPSVSSINRIVRNK-- 301

  Fly   135 WTDEMTSSQQNAAAAAAAAAAAAHQAGSGPSNGYGGQAPPPPV-----TVAPPTPAATPSIARYA 194
                         ||..|.....||......:..||......|     |:..|.|..:.|.|...
  Fly   302 -------------AAEKAKHVHHHQQHHVSQSLGGGHIATESVDSSTGTIGEPQPPTSNSSANSV 353

  Fly   195 KPPALMMNSA-GEMPIKPAPKMPPSMGH---------------------------------GHSH 225
            ........|. ..:|......:..|:||                                 .|||
  Fly   354 NTNVSASASVHASIPTSGTDSVQVSVGHINANSNETTHINSTAEQRTTGYSINGILGIQHGHHSH 418

  Fly   226 GLNPN--VSGLDLSYSALHKHWLWNPSLLYYTQAHI-------QAQAAASGGQFLP--YAGGYL- 278
            ..|.|  |:..:.:.|:..:..:......:.|..|.       |..:..||.|...  ::|.:. 
  Fly   419 NNNNNSSVNNNNNTESSCKRKRIEAHDENHDTNIHSDNDDGKRQRMSTYSGDQLYTNIWSGKWCI 483

  Fly   279 --PHAMAAAAASSTSALGG--FTKSESSIDLSTPGAAG--------------DALSDCDSGKSSP 325
              .|.:.|...:.|::.|.  .|..|:|...||...:|              |:::.....:|| 
  Fly   484 KDDHKLLAELGNLTASTGNCPATYYEASNGFSTTPISGSGATASGNDTSMLYDSITTISQTQSS- 547

  Fly   326 AALSLTASGGGNGAGSAPEASPGSTLSHSRKRNPYSIEELLKKP-EKRLRLDSNRLECLESSSCE 389
              :...|.|...|.||.....|.|  .|..|.:..||:|....| ...|..|.|........:|.
  Fly   548 --IYTPAIGPSIGTGSLTPLVPIS--MHEMKLSANSIQEQTVPPFYTALAFDGNYTSMTSLENCS 608

  Fly   390 S-----------SQDSPVAPPLETPEDEDPAEAEEEQEEE 418
            |           |.||....|:.|....|..|....:.:|
  Fly   609 SLVGQEHIVMPESSDSNTLCPISTRIVPDITETNSTRVKE 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxnNP_001261016.1 HTH 5..133 CDD:304362 89/127 (70%)
svNP_524633.3 PAX 175..299 CDD:128645 87/124 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451038
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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