DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxn and Poxm

DIOPT Version :10

Sequence 1:NP_476686.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001036687.1 Gene:Poxm / 40990 FlyBaseID:FBgn0003129 Length:370 Species:Drosophila melanogaster


Alignment Length:398 Identity:141/398 - (35%)
Similarity:180/398 - (45%) Gaps:116/398 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PHTGQAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTRFYETGS 66
            |..|:  |||||||||||||||:..|.|||:||..|:|||||||||.||||||||||.|::||||
  Fly     8 PQYGE--VNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILARYHETGS 70

  Fly    67 IRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSVPSISSINRILRN 131
            |.||:|||||.: |.||.||..|..||:.:.|:||||||::|..:.:||.::|||:|||:|||||
  Fly    71 ILPGAIGGSKPR-VTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVPSVSSISRILRN 134

  Fly   132 --------------------SGLWTDEMTSSQQNAAAA--------------------------A 150
                                ||..:......|.|..:|                          :
  Fly   135 KLGSLGHQHTPGTVMGSGSSSGGGSVSSNGGQNNGTSASNNINLSNLGNPGGGPHHPHHHHHHQS 199

  Fly   151 AAAAAAAHQA---GSGPSNGYGGQAPPPPVTVA--PPTPAATPSIARYAKPPALMMNSAGEMPIK 210
            |||||:||..   ....::.|.....|.....|  ..||..:||      ||    ..||     
  Fly   200 AAAAASAHHVHAHAHAHAHLYNSIYQPYSAAAAYSMKTPCGSPS------PP----QGAG----- 249

  Fly   211 PAPKMPPSMGHG---HSHGLNPNVSGLDLSYSALHKHWLWNPSLLYYTQ--AHIQAQAAASGGQF 270
                     |.|   |.|.|.      .::.:|...||   ||....:.  ||.||.|..:..|.
  Fly   250 ---------GQGSVPHPHQLR------SVAAAAAAAHW---PSSHSVSDILAHHQAVALRASCQV 296

  Fly   271 LPYAGGYLPHAMAAAAASSTSALGGFTKSESSIDLSTPG-----AAGDALSDCD--SGKSSPAAL 328
            ....||                :||...:.|.:.: ||.     |.|..|.||:  :|:.||...
  Fly   297 GVGVGG----------------MGGMGSTVSPLPM-TPSPVAGTAGGQPLLDCEGGAGQQSPYNY 344

  Fly   329 SLTASGGG 336
            .:....||
  Fly   345 YMYFQNGG 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxnNP_476686.1 HTH_ARSR 5..133 CDD:481197 84/147 (57%)
PoxmNP_001036687.1 PAX 10..133 CDD:128645 81/125 (65%)

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