DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxn and gsb

DIOPT Version :9

Sequence 1:NP_001261016.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster


Alignment Length:414 Identity:125/414 - (30%)
Similarity:172/414 - (41%) Gaps:162/414 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PHTGQAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTRFYETGS 66
            |..||..||||||||:||||||:.:||:||::|..|||||.|||||.||||||||||.||.||||
  Fly    16 PFQGQGRVNQLGGVFINGRPLPNHIRRQIVEMAAAGVRPCVISRQLRVSHGCVSKILNRFQETGS 80

  Fly    67 IRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSVPSISSINRILRN 131
            ||||.|||||.: ||||.:..:|..||:...|:|:||||.:|.:..|||..:.||:|||:|:||.
  Fly    81 IRPGVIGGSKPR-VATPDIESRIEELKQSQPGIFSWEIRAKLIEAGVCDKQNAPSVSSISRLLRG 144

  Fly   132 SG--------------------------------------------------------------- 133
            |.                                                               
  Fly   145 SSGSGTSHSIDGILGGGAGSVGSEDESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQY 209

  Fly   134 ---------------------LW-------------TDEM-----TSSQQNAAAAAAAAAA---- 155
                                 :|             |.::     ||:...|....:||.|    
  Fly   210 PDVYTREELAQSTGLTEARVQVWFSNRRARLRKQLNTQQVPSFAPTSTSFGATPTTSAAPAPNMG 274

  Fly   156 -AAHQAGSGPSNG-------YGGQAPPPPVTVAPPTPAATPSIARYAKPPALMMNSAGEMPIKPA 212
             :.:.:.|.||:|       |||       :||..:||::.|          ..:||...|::..
  Fly   275 MSLYSSQSWPSSGAYENHAAYGG-------SVASMSPASSTS----------GTSSAAHSPVQTQ 322

  Fly   213 PKMP--------PSMGHGHSHGLNPNVSGLDLSYSALHKHWLWNPSLLYYTQAHIQAQ--AAASG 267
            .:.|        .:.|.|.|:...|:.     :||.        |.....:...:::|  :||:.
  Fly   323 AQQPGTGSEFMTSTYGVGSSNATYPSA-----AYSM--------PQTPATSAEQLRSQFASAAAS 374

  Fly   268 GQFLP-------YAGGYLPHAMAA 284
            |...|       :||.:.|.|.||
  Fly   375 GSHHPSTWDSYNFAGSFFPPASAA 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxnNP_001261016.1 HTH 5..133 CDD:304362 81/127 (64%)
gsbNP_523863.1 PAX 19..143 CDD:128645 79/124 (64%)
homeodomain 186..243 CDD:238039 1/56 (2%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451003
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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