DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxn and otp

DIOPT Version :10

Sequence 1:NP_476686.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001286654.1 Gene:otp / 37364 FlyBaseID:FBgn0015524 Length:416 Species:Drosophila melanogaster


Alignment Length:226 Identity:53/226 - (23%)
Similarity:74/226 - (32%) Gaps:66/226 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 SGMFA---WEIR--------EQLQQQRVCDPSSVPSISSINRILRNSGLWTDEMTSS------QQ 144
            :|||.   |.:.        .||.|       |.|..||:|..| |||:   .|.|:      |.
  Fly   212 TGMFGGDRWSVGVNPMTAGFGQLNQ-------SSPLSSSLNSGL-NSGI---NMGSALGAGSYQH 265

  Fly   145 NAAAAAAAAAAAAHQAGS---GPSNGYGGQAPP---PPVTVAPPTPAATPSIARYAKPPALMMNS 203
            ....|...:....|..|.   |||.......||   ...:|.||..:|.|:            :|
  Fly   266 YGLNALGDSMMYQHSVGGVSCGPSGSPSATTPPNMNSCSSVTPPPLSAQPN------------SS 318

  Fly   204 AGEMPIKPAPKMPPSMGHGHSHGLNPNVSGLDLSYSALHKHWLWNPSLLYYTQAHI-QAQAAASG 267
            ..|:..:|.|.........|.|           .....|:|....|......|..: |:..:.|.
  Fly   319 QNELNGEPMPLHQQQQQQTHQH-----------QQQQTHQHHPMAPPTPTQQQQQLPQSMQSPSD 372

  Fly   268 GQFLPYAGGYLPHAMAA--AAASSTSALGGF 296
            |     |...| |::||  ..||..:|:..:
  Fly   373 G-----ANDTL-HSIAALRRRASELNAIPSY 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxnNP_476686.1 HTH_ARSR 5..133 CDD:481197 14/46 (30%)
otpNP_001286654.1 Homeodomain 117..168 CDD:459649
Blue background indicates that the domain is not in the aligned region.

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