DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxn and otp

DIOPT Version :9

Sequence 1:NP_001261016.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001286654.1 Gene:otp / 37364 FlyBaseID:FBgn0015524 Length:416 Species:Drosophila melanogaster


Alignment Length:226 Identity:53/226 - (23%)
Similarity:74/226 - (32%) Gaps:66/226 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 SGMFA---WEIR--------EQLQQQRVCDPSSVPSISSINRILRNSGLWTDEMTSS------QQ 144
            :|||.   |.:.        .||.|       |.|..||:|..| |||:   .|.|:      |.
  Fly   212 TGMFGGDRWSVGVNPMTAGFGQLNQ-------SSPLSSSLNSGL-NSGI---NMGSALGAGSYQH 265

  Fly   145 NAAAAAAAAAAAAHQAGS---GPSNGYGGQAPP---PPVTVAPPTPAATPSIARYAKPPALMMNS 203
            ....|...:....|..|.   |||.......||   ...:|.||..:|.|:            :|
  Fly   266 YGLNALGDSMMYQHSVGGVSCGPSGSPSATTPPNMNSCSSVTPPPLSAQPN------------SS 318

  Fly   204 AGEMPIKPAPKMPPSMGHGHSHGLNPNVSGLDLSYSALHKHWLWNPSLLYYTQAHI-QAQAAASG 267
            ..|:..:|.|.........|.|           .....|:|....|......|..: |:..:.|.
  Fly   319 QNELNGEPMPLHQQQQQQTHQH-----------QQQQTHQHHPMAPPTPTQQQQQLPQSMQSPSD 372

  Fly   268 GQFLPYAGGYLPHAMAA--AAASSTSALGGF 296
            |     |...| |::||  ..||..:|:..:
  Fly   373 G-----ANDTL-HSIAALRRRASELNAIPSY 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxnNP_001261016.1 HTH 5..133 CDD:304362 14/46 (30%)
otpNP_001286654.1 Homeobox 119..167 CDD:278475
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450954
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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