DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxn and prd

DIOPT Version :9

Sequence 1:NP_001261016.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster


Alignment Length:507 Identity:143/507 - (28%)
Similarity:213/507 - (42%) Gaps:127/507 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 HTGQAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTRFYETGSI 67
            ::||..||||||||:||||||:.:|.:||::|..|:|||.|||||.||||||||||.|:.|||||
  Fly    25 NSGQGRVNQLGGVFINGRPLPNNIRLKIVEMAADGIRPCVISRQLRVSHGCVSKILNRYQETGSI 89

  Fly    68 RPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSVPSISSINRILRNS 132
            |||.|||||.: :|||.:..:|...|..:.|||:|||||:|.::.|||.|:.||:|:|:|::|..
  Fly    90 RPGVIGGSKPR-IATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPSVSAISRLVRGR 153

  Fly   133 GLWTDEMTSSQQNAAAAAAAAAAAAHQAGSGPSNGYGGQAPP-----------PPVTV------- 179
            ....|...||...:.|.....|:::  .||..|.|:.....|           |.:.:       
  Fly   154 DAPLDNDMSSASGSPAGDGTKASSS--CGSDVSGGHHNNGKPSDEDISDCESEPGIALKRKQRRC 216

  Fly   180 --------------------------------------------------------------APP 182
                                                                          ||.
  Fly   217 RTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQHTSVSGGAPG 281

  Fly   183 TPAATPS-IARYAKPPALMMNSAGEMPIKPAP-KMPPSMGHGHS---HGLNPNVS---GLDLSYS 239
            ..||:.| :|..:..|:::.:.....|:...| .:.|:..:...   :|.:.|:|   ...::.|
  Fly   282 GAAASVSHVAASSSLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFYGSHANISVSAAAPMASS 346

  Fly   240 AL---------HKHWLWNPSLLYYTQAHIQAQAAASGGQFLPYAGGYLPHAMAAAAASSTSALGG 295
            .|         |.|..:|||             |.:....:|...|..........:|..:.||.
  Fly   347 NLSPGITTTPPHHHQFYNPS-------------ANTASYIMPGENGNTTPTGNIIVSSYETQLGS 398

  Fly   296 F--TKSESSIDLSTPGAAGDALSDCDSGKSSPAALSLTASGGGNGAGSAPEASPGSTLSHSRKRN 358
            .  |::|:...:....:..:::|.. .|:..|...||:|...|.|..|:..|:.|:..|.|....
  Fly   399 VYGTETETHQTMPRNESPNESVSSA-FGQLPPTPNSLSAVVSGAGVTSSSGANSGADPSQSLANA 462

  Fly   359 PYSIEELLKKPEKRLRLDSNRLECLESSSCESSQDS-----PVAPPLETPED 405
            ....|||    ...|:::|..|.....|.......|     |.||  .:|||
  Fly   463 SAGSEEL----SAALKVESVDLIAASQSQLYGGWSSMQALRPNAP--LSPED 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxnNP_001261016.1 HTH 5..133 CDD:304362 77/127 (61%)
prdNP_723721.1 PAX 27..154 CDD:238076 77/127 (61%)
Homeobox 217..269 CDD:278475 0/51 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451005
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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