DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxn and prd

DIOPT Version :10

Sequence 1:NP_476686.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster


Alignment Length:507 Identity:143/507 - (28%)
Similarity:213/507 - (42%) Gaps:127/507 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 HTGQAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTRFYETGSI 67
            ::||..||||||||:||||||:.:|.:||::|..|:|||.|||||.||||||||||.|:.|||||
  Fly    25 NSGQGRVNQLGGVFINGRPLPNNIRLKIVEMAADGIRPCVISRQLRVSHGCVSKILNRYQETGSI 89

  Fly    68 RPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSVPSISSINRILRNS 132
            |||.|||||.: :|||.:..:|...|..:.|||:|||||:|.::.|||.|:.||:|:|:|::|..
  Fly    90 RPGVIGGSKPR-IATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPSVSAISRLVRGR 153

  Fly   133 GLWTDEMTSSQQNAAAAAAAAAAAAHQAGSGPSNGYGGQAPP-----------PPVTV------- 179
            ....|...||...:.|.....|:::  .||..|.|:.....|           |.:.:       
  Fly   154 DAPLDNDMSSASGSPAGDGTKASSS--CGSDVSGGHHNNGKPSDEDISDCESEPGIALKRKQRRC 216

  Fly   180 --------------------------------------------------------------APP 182
                                                                          ||.
  Fly   217 RTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQHTSVSGGAPG 281

  Fly   183 TPAATPS-IARYAKPPALMMNSAGEMPIKPAP-KMPPSMGHGHS---HGLNPNVS---GLDLSYS 239
            ..||:.| :|..:..|:::.:.....|:...| .:.|:..:...   :|.:.|:|   ...::.|
  Fly   282 GAAASVSHVAASSSLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFYGSHANISVSAAAPMASS 346

  Fly   240 AL---------HKHWLWNPSLLYYTQAHIQAQAAASGGQFLPYAGGYLPHAMAAAAASSTSALGG 295
            .|         |.|..:|||             |.:....:|...|..........:|..:.||.
  Fly   347 NLSPGITTTPPHHHQFYNPS-------------ANTASYIMPGENGNTTPTGNIIVSSYETQLGS 398

  Fly   296 F--TKSESSIDLSTPGAAGDALSDCDSGKSSPAALSLTASGGGNGAGSAPEASPGSTLSHSRKRN 358
            .  |::|:...:....:..:::|.. .|:..|...||:|...|.|..|:..|:.|:..|.|....
  Fly   399 VYGTETETHQTMPRNESPNESVSSA-FGQLPPTPNSLSAVVSGAGVTSSSGANSGADPSQSLANA 462

  Fly   359 PYSIEELLKKPEKRLRLDSNRLECLESSSCESSQDS-----PVAPPLETPED 405
            ....|||    ...|:::|..|.....|.......|     |.||  .:|||
  Fly   463 SAGSEEL----SAALKVESVDLIAASQSQLYGGWSSMQALRPNAP--LSPED 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxnNP_476686.1 HTH_ARSR 5..133 CDD:481197 77/127 (61%)
prdNP_723721.1 PAX 27..154 CDD:238076 77/127 (61%)
Homeodomain 214..270 CDD:459649 0/55 (0%)

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