DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxn and al

DIOPT Version :10

Sequence 1:NP_476686.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster


Alignment Length:258 Identity:60/258 - (23%)
Similarity:84/258 - (32%) Gaps:78/258 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 QNAAAAAAAAAAAAHQAGSGPSNGYGGQ---APP---PPVTVAPPTPA-----------ATPSIA 191
            |:||..||........|...|| ||..|   |||   |.......:|:           |.|...
  Fly   191 QHAANLAAFRYPHLSAAPMIPS-GYFNQFQRAPPHMLPHGMAGMYSPSSSFQSLLANMTAVPRGT 254

  Fly   192 RYAKPPALMMNSAG-EMP--IKPAPKMPPSMGHGHSHGLNPNVSGLDLSYSALHKHWLWNPSLLY 253
            ...|||||::.|.. ..|  :..:|...|:.||...|..:|.                       
  Fly   255 PLGKPPALLVGSPDLHSPNHMLASPPTSPASGHASQHQQHPT----------------------- 296

  Fly   254 YTQAHIQAQAAASGGQFLPYAGGYLPHAMAAAAASSTSALG-GFTKSESSIDLSTPGAAGDALSD 317
               ||...          |.|...:|..:..|..|....:| ..|:..||:..:           
  Fly   297 ---AHPPP----------PQAPPQMPVGVQPAQLSPQHLVGIALTQQASSLSPT----------- 337

  Fly   318 CDSGKSSPAALSLTASGGGN---GAGSAPEASPGSTLSHSRKRNPYSIEEL-LKKPEKRLRLD 376
                ::||.||:|:.|....   .:..||...|.:......:|.. ||..| ||..|..|:|:
  Fly   338 ----QTSPVALTLSHSPQRQLPPPSHQAPPPPPRAATPPEDRRTS-SIAALRLKAREHELKLE 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxnNP_476686.1 HTH_ARSR 5..133 CDD:481197
alNP_722629.1 Homeodomain 86..142 CDD:459649
OAR 374..391 CDD:461067 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.

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