DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxn and unc-4

DIOPT Version :9

Sequence 1:NP_001261016.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001285389.1 Gene:unc-4 / 32757 FlyBaseID:FBgn0024184 Length:588 Species:Drosophila melanogaster


Alignment Length:383 Identity:82/383 - (21%)
Similarity:107/383 - (27%) Gaps:133/383 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 NAAAA------AAAAAAAAHQAGSGPSNGYGGQAPPPPVTVAPPTPAATPSIARYAKPPA----- 198
            :||:|      |||||||...|....||.:..........:...:.|.|.::|..|...|     
  Fly   141 DAASAGGHPNSAAAAAAATQMAAVNASNAFANLTGLSAAALRNVSAAQTTAVAAVASTVATIQHR 205

  Fly   199 LMMNSAGEMPIKPAPKMPPSMGHGHSHGL------------------NPN---VSGLDLSYSALH 242
            ||:.:...:|    |..|||.|.....|.                  |.|   :..|:.::||.|
  Fly   206 LMIGNRQSLP----PAGPPSEGSNEDGGFPGDGDDDSSAAKRRRSRTNFNSWQLEELERAFSASH 266

  Fly   243 ---------------------KHWLWNPSLLYYTQAHIQ---------AQAAASGGQFLP----- 272
                                 ..|..|.......:.|.:         ||.....|:.:|     
  Fly   267 YPDIFMREALAMRLDLKESRVAVWFQNRRAKVRKREHTKKGPGRPAHNAQPQTCSGEPIPPNELK 331

  Fly   273 ----------------------YAGGYLP--HAMAAAAASSTSALGGFTKSESSIDLSTPGAAGD 313
                                  .|.|...  .|:.|...|...|.|.|:.|    ||...|...|
  Fly   332 AKERARRRKKLAKAIDRQARKLQAKGITVDLEALKAEYISQHKANGTFSDS----DLEDDGIQID 392

  Fly   314 ALSDCDSGKSSPA-ALSLTASGGGNGAGSAPEASPGSTLSHSRKRNPYSIEELLKKPEKRLRL-- 375
            .:...||.....: |:|....|||.|.|.......|...|.|                  |..  
  Fly   393 VVGGTDSDDEGDSDAVSPVRLGGGGGGGGGTGGGGGGGASSS------------------LHCGL 439

  Fly   376 ----DSNRLECLESSSCESSQDSPVAPP---------LETPEDEDPAEAEEEQEEEDS 420
                ||:|..............|.||||         ....|..|..|:||...|.||
  Fly   440 DGDGDSSRAGSFIGGGGSLGSPSSVAPPSMLSNGAVQFGKLEPMDGNESEERDRERDS 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxnNP_001261016.1 HTH 5..133 CDD:304362
unc-4NP_001285389.1 Homeobox 246..299 CDD:278475 8/52 (15%)
NK <327..>368 CDD:302627 3/40 (8%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450925
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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