Protein Alignment Poxn and pax7a

DIOPT Version :10

• Sequence 1: NP_476686.1
• Gene: Poxn / 36741
• FlyBaseID: FBgn0003130
• Length: 425
• Species: Drosophila melanogaster
• Sequence 2: NP_571400.1
• Gene: pax7a / 30587
• ZFINID: ZDB-GENE-990415-201
• Length: 507
• Species: Danio rerio
• Alignment Length: 447
• Identity: 137/447 - (30%)
• Similarity: 189/447 - (42%)
• Gaps: 147/447 - (32%)

  Fly     5 GQAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTRFYETGSIRP 69
            ||..||||||||:||||||:.:|.:||::|..|:|||.|||||.||||||||||.|:.|||||||
Zfish    34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRP 98

  Fly    70 GSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSVP-----SISSINRIL 129
            |:|||||.:|||||.|.|:|...|.||.|||:||||::|.:..|||..:||     |:|||:|:|
Zfish    99 GAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRGTVPSGEASSVSSISRVL 163

  Fly   130 R--------------------------------NSGLWTDE-----------MTSSQQNAAAAAA 151
            |                                :.|..|||           :...|:.:.....
Zfish   164 RARFGKKDDDDECDKKDEDGEKKTKHSIDGILGDKGNRTDEGSDVESEPDLPLKRKQRRSRTTFT 228

  Fly   152 A--------AAAAAH----------------------------------QAGSGPSNGYGGQAPP 174
            |        |....|                                  |||:.....:....|.
Zfish   229 AEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPG 293

  Fly   175 PPVTVAPPTPAATPSIARYAKP----PALMMNSAGEMPI-KPAPKMPPSMGH--------GHSHG 226
            .    .|||  ..|::..|..|    |:..::..|...: :|.| :|||..|        |.::|
Zfish   294 G----FPPT--GMPTLPTYQLPESTYPSTTLSQDGSSTLHRPQP-LPPSSMHQGGLSADSGSAYG 351

  Fly   227 LNPNVSGLDLSYSALHKHWLWNPSLLYYTQAHIQAQAAASGGQFLPYAGGYLPHAMAAAAASSTS 291
            |:.|            :|     :...|::..:  ...||.....|.:.|..|..|  :..|:.|
Zfish   352 LSSN------------RH-----TFSSYSETFM--SPTASSNHMNPVSNGLSPQVM--SILSNPS 395

  Fly   292 ALGGFTKSESSI-------DLSTPGAA-----GDALSDCDSGKSS----PAALSLTA 332
            |:....:.:.||       :.|.|.:|     .|.:...||..|:    |...|.|:
Zfish   396 AVPSQPQHDFSISPLHGGLEASNPISASCSQRSDPIKSVDSLASTQSYCPPTYSATS 452

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Poxn	NP_476686.1	HTH_ARSR	5..133	CDD:481197	84/164 (51%)
pax7a	NP_571400.1	PAX	34..166	CDD:238076	84/131 (64%)
		Homeodomain	221..277	CDD:459649	3/55 (5%)
		Pax7	343..386	CDD:403540	10/61 (16%)