DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxn and pax9

DIOPT Version :10

Sequence 1:NP_476686.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_571373.1 Gene:pax9 / 30558 ZFINID:ZDB-GENE-980526-399 Length:343 Species:Danio rerio


Alignment Length:363 Identity:135/363 - (37%)
Similarity:179/363 - (49%) Gaps:61/363 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PHTGQAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTRFYETGS 66
            |..|:  |||||||||||||||:.:|.|||:||..|:|||||||||.||||||||||.|:.||||
Zfish     3 PAFGE--VNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYNETGS 65

  Fly    67 IRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSVPSISSINRILRN 131
            |.||:|||||.: |.||.|||.|...|:.:.|:||||||::|....|||..::||:|||:|||||
Zfish    66 ILPGAIGGSKPR-VTTPNVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKFNLPSVSSISRILRN 129

  Fly   132 S-GLWTDEMTSSQQNAAAAAAAAAAAAHQAGSGPSNGYGG-QAPPPPVTVA---PPTPAATPSI- 190
            . |      ..||||...::..|:....|    |:..|.. .:.|.|:..|   .|||...|:: 
Zfish   130 KIG------NLSQQNQYESSKQASHPQPQ----PTIPYNHLYSYPTPIAAAGTKVPTPPGMPTLP 184

  Fly   191 ----------ARYAKPPALMMNSAGEMPIKPAPKMPPSM--------GHGHSHGLNPNVSGLD-- 235
                      :.::....|.:.|..|..|...|..|.:.        ....|...:|.|:|:|  
Zfish   185 GHMAMHRIWPSSHSVTDILGIRSITEQQISDNPSFPSAKLEEWRAINRSNFSPANSPLVNGVDKP 249

  Fly   236 -LSYSALHKH----------WLWNPSLLYYTQAHIQAQAAASGGQFLPYAGGYLPHAMAAAAASS 289
             |...|.:..          ::..||:.:|   |...|.:       ||. ||.....|.....:
Zfish   250 HLEPEAKYNQTPNGLPTVNSYVTAPSIHHY---HPPTQVS-------PYM-GYSGTTSAYVTGPT 303

  Fly   290 TSALGGFTKSESSIDLSTPGAAGDALSDCDSGKSSPAA 327
            .....|...|..|.|:|:|.|.....:..||..|..|:
Zfish   304 WQPPSGSALSPHSCDISSPLAFKSMSATRDSVHSLVAS 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxnNP_476686.1 HTH_ARSR 5..133 CDD:481197 84/128 (66%)
pax9NP_571373.1 PAX 6..131 CDD:238076 84/127 (66%)

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