DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxn and npax-3

DIOPT Version :10

Sequence 1:NP_476686.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_502006.2 Gene:npax-3 / 187848 WormBaseID:WBGene00011257 Length:205 Species:Caenorhabditis elegans


Alignment Length:92 Identity:34/92 - (36%)
Similarity:45/92 - (48%) Gaps:13/92 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTRFYETGSIRP--- 69
            |.|..|..:..||||....|.||:.|...|::...||:.|.:||||||||::||..||.:.|   
 Worm    81 GTNLYGRPYCPGRPLSMEERTRIIQLHNNGMKVNAISKSLCISHGCVSKIISRFRATGVLLPACS 145

  Fly    70 ----------GSIGGSKTKQVATPTVV 86
                      .|:.||..:|...|..|
 Worm   146 PEQRKSRKRKSSMEGSAMEQSFIPVFV 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxnNP_476686.1 HTH_ARSR 5..133 CDD:481197 34/92 (37%)
npax-3NP_502006.2 PAX 78..200 CDD:128645 34/92 (37%)

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