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Protein Alignment Poxn and pax-1
DIOPT Version :9
Sequence 1: | NP_001261016.1 |
Gene: | Poxn / 36741 |
FlyBaseID: | FBgn0003130 |
Length: | 425 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_505120.1 |
Gene: | pax-1 / 187105 |
WormBaseID: | WBGene00003937 |
Length: | 257 |
Species: | Caenorhabditis elegans |
Alignment Length: | 138 |
Identity: | 82/138 - (59%) |
Similarity: | 103/138 - (74%) |
Gaps: | 1/138 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 AGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTRFYETGSIRPGS 71
|.|||||||||||||||..:|.:||:|:..|.|||||||||.:||||||||||||.|.|:|.||:
Worm 63 AEVNQLGGVFVNGRPLPFEMRCKIVELSRQGTRPCDISRQLKISHGCVSKILTRFSENGTIMPGT 127
Fly 72 IGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSVPSISSINRILRNSGLWT 136
||||:.: |.||.||:.|..||..:.|:||||||::|....:||.:::||:|||:|||||.....
Worm 128 IGGSRPR-VTTPKVVEYIRSLKRSDPGIFAWEIRDRLISADICDRANLPSVSSISRILRNKNGGN 191
Fly 137 DEMTSSQQ 144
...:||.|
Worm 192 SSSSSSSQ 199
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Poxn | NP_001261016.1 |
HTH |
5..133 |
CDD:304362 |
79/125 (63%) |
pax-1 | NP_505120.1 |
PAX |
61..185 |
CDD:128645 |
76/122 (62%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C160156317 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR45636 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.940 |
|
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