DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Poxn and Pax7

DIOPT Version :9

Sequence 1:NP_001261016.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster
Sequence 2:XP_006538692.1 Gene:Pax7 / 18509 MGIID:97491 Length:505 Species:Mus musculus


Alignment Length:467 Identity:140/467 - (29%)
Similarity:185/467 - (39%) Gaps:153/467 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GQAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTRFYETGSIRP 69
            ||..||||||||:||||||:.:|.:||::|..|:|||.|||||.||||||||||.|:.|||||||
Mouse    34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRP 98

  Fly    70 GSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSVPS--ISSINRILR-- 130
            |:|||||.:|||||.|.|||...|.||.|||:||||::|.:...||.|:|||  :|||:|:||  
Mouse    99 GAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLVSSISRVLRIK 163

  Fly   131 ------------------------------NSGLWTDE-----------MTSSQQNAAAAAAA-- 152
                                          :.|...||           :...|:.:.....|  
Mouse   164 FGKKEDDEEGDKKEEDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQ 228

  Fly   153 ------AAAAAH----------------------------------QAGSGPSNGYG----GQAP 173
                  |....|                                  |||:.....:.    |..|
Mouse   229 LEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFP 293

  Fly   174 PPPVTVAPP--TPAATPSIARYAKPPALMMNSAGEMPIKPAPKMPPSMGHGHSHGLNPNVSGLDL 236
            |..:...||  .|.:|       .|...:....|....:|.|..|.:|   |..||....:..|.
Mouse   294 PTGMPTLPPYQLPDST-------YPTTTISQDGGSTVHRPQPLPPSTM---HQGGLAAAAAAADT 348

  Fly   237 S--YSALHKHWLWNPSLLYYTQAHIQAQAAASGGQFLPYAGGYLPHAMAAAAASSTSALGGFTKS 299
            |  |.|.|....::.|.:         ...|......|.:.|..|..|:.               
Mouse   349 SSAYGARHSFSSYSDSFM---------NPGAPSNHMNPVSNGLSPQVMSI--------------- 389

  Fly   300 ESSIDLSTPGA------AGDALSDCDSGKSSPAALSLTASGGGNGAGSAPEASPGSTLSHSRKRN 358
                 ||.|.|      |..::|....|..|.:::|.:.|      ..|....||.:|..|:...
Mouse   390 -----LSNPSAVPPQPQADFSISPLHGGLDSASSISASCS------QRADSIKPGDSLPTSQSYC 443

  Fly   359 P-------YSIE 363
            |       ||::
Mouse   444 PPTYSTTGYSVD 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxnNP_001261016.1 HTH 5..133 CDD:304362 85/161 (53%)
Pax7XP_006538692.1 PAX 34..161 CDD:128645 83/126 (66%)
Homeobox 220..274 CDD:365835 3/53 (6%)
Pax7 347..385 CDD:372070 9/46 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.