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Protein Alignment Poxn and Pax6
DIOPT Version :9
| Sequence 1: | NP_001261016.1 |
Gene: | Poxn / 36741 |
FlyBaseID: | FBgn0003130 |
Length: | 425 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001231127.1 |
Gene: | Pax6 / 18508 |
MGIID: | 97490 |
Length: | 436 |
Species: | Mus musculus |
| Alignment Length: | 156 |
Identity: | 87/156 - (55%) |
| Similarity: | 107/156 - (68%) |
Gaps: | 22/156 - (14%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 7 AGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISR----------QLL----VSHGCVSKI 57
:|||||||||||||||||..|::||:||..|.||||||| |:| ||:||||||
Mouse 6 SGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNENVSNGCVSKI 70
Fly 58 LTRFYETGSIRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSVPSI 122
|.|:||||||||.:|||||.: ||||.||.||.:.|.|...:||||||::|..:.||...::||:
Mouse 71 LGRYYETGSIRPRAIGGSKPR-VATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSV 134
Fly 123 SSINRILRNSGLWTDEMTSSQQNAAA 148
|||||:||| :.|.:|...|
Mouse 135 SSINRVLRN-------LASEKQQMGA 153
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Poxn | NP_001261016.1 |
HTH |
5..133 |
CDD:304362 |
84/139 (60%) |
| Pax6 | NP_001231127.1 |
PAX |
4..142 |
CDD:128645 |
81/136 (60%) |
| Homeobox |
228..281 |
CDD:395001 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0849 |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| Isobase |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
0 | 0.000 |
Not matched by this tool. |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
0 | 0.000 |
Not matched by this tool. |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
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