DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxn and npax-1

DIOPT Version :10

Sequence 1:NP_476686.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_495533.2 Gene:npax-1 / 184779 WormBaseID:WBGene00017664 Length:176 Species:Caenorhabditis elegans


Alignment Length:123 Identity:41/123 - (33%)
Similarity:62/123 - (50%) Gaps:25/123 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VNQLGGVFVNGRPLPDCV--RRRIVDLALCGVRPCDISRQLLVSHGCVSKILTRFYETGSIRPGS 71
            |..:|..:..||||  |:  |::||.|...|.|...|:|.:.|:|.|||||::|:..|||::|.|
 Worm    60 VKAVGRSYNPGRPL--CLEDRKKIVRLYEEGCRVSHIARLIGVTHSCVSKIMSRYRRTGSVQPRS 122

  Fly    72 IGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSVPSISSINRIL 129
            ...::                .:||... .|: ::||:||:   ....|...||.|||
 Worm   123 FRATE----------------NQENDNA-TWQ-QQQLKQQQ---KKEKPLPFSIERIL 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxnNP_476686.1 HTH_ARSR 5..133 CDD:481197 41/123 (33%)
npax-1NP_495533.2 HTH_ARSR 60..>122 CDD:481197 27/63 (43%)

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