DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxn and pax9

DIOPT Version :10

Sequence 1:NP_476686.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster
Sequence 2:XP_002935394.1 Gene:pax9 / 100485934 XenbaseID:XB-GENE-482238 Length:360 Species:Xenopus tropicalis


Alignment Length:390 Identity:142/390 - (36%)
Similarity:184/390 - (47%) Gaps:77/390 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PHTGQAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTRFYETGS 66
            |..|:  |||||||||||||||:.:|.|||:||..|:|||||||||.||||||||||.|:.||||
 Frog     3 PAFGE--VNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYNETGS 65

  Fly    67 IRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSVPSISSINRILRN 131
            |.||:|||||.: |.||||||.|...|:.:.|:||||||::|....|||..:|||:|||:|||||
 Frog    66 ILPGAIGGSKPR-VTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRN 129

  Fly   132 ---SGLWTDEMTSSQQNAAAAAAAAAAAAHQAGSGPSNGYGGQAPPPPVTVAPPTPAATPSIARY 193
               :....:...|.:|:.|||:|.           |.|.......|.......|||...|||...
 Frog   130 KIGNLAQQNHYESHKQHPAAASAL-----------PYNHLYSYPSPIAAGAKVPTPPGMPSIPGT 183

  Fly   194 AKPPALMMNSAGEMPI---------------KPAPKMP--PSMGHGHSHGLNPNVSGLDLSYSAL 241
            ...|....:|.....|               .|:||:.  .|:...........::||:.|    
 Frog   184 MGMPRTWPSSHSVTDILGIRSITDQVSDTSPYPSPKLEEWSSLSRNTFQSAQHVLNGLEKS---- 244

  Fly   242 HKHWLWNPSLLYYTQAHIQAQAAASGGQFLPYAGGYL------PHAMAAAA----ASSTSALGGF 296
                    ||    :..::...:|||   ||...|::      |:...|..    |.||:|..|:
 Frog   245 --------SL----EQEVKYSQSASG---LPAVSGFVAASGMTPYPTTAPVSPYMAYSTAAPTGY 294

  Fly   297 TKSESSIDLSTPGAAGDALSDCDSGKSSPAALSLTASGGGNGAGSAPEASPGSTLSHSRKRNPYS 361
                         ..|...........||.:..:|||....|..:|.||.......|:|| :|.|
 Frog   295 -------------VTGHGWQHTGGTPLSPHSCDITASLAFKGMHTAREAEESKLSIHTRK-SPQS 345

  Fly   362  361
             Frog   346  345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxnNP_476686.1 HTH_ARSR 5..133 CDD:481197 86/130 (66%)
pax9XP_002935394.1 PAX 6..131 CDD:238076 86/127 (68%)

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