DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp52 and PDLIM1

DIOPT Version :10

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:NP_066272.1 Gene:PDLIM1 / 9124 HGNCID:2067 Length:329 Species:Homo sapiens


Alignment Length:364 Identity:110/364 - (30%)
Similarity:168/364 - (46%) Gaps:74/364 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQPGDAVVKINDVDVFNLRHKDAQDIVVRSGNNF 82
            ||||||.||.||.|||.:.:|..||.:..|.|..||.:..|:..:..|:.|.:||:.:....:|.
Human    13 PWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNL 77

  Fly    83 VITVQRG-GSTWRPHVTPTGNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPF-SNGGD 145
            .:||.|. ...|.|.||..|.    ..||     |.:||.:.|:..|||..:|.:|.|| ::...
Human    78 TLTVARSEHKVWSPLVTEEGK----RHPY-----KMNLASEPQEVLHIGSAHNRSAMPFTASPAS 133

  Fly   146 GGVKSIVNKQYNTPVGIYSDESIAETLSA-QAEVLAGGVLGVNFKKNEKEYQ----------GDR 199
            .....::..|||.|.|:||.|:|:...:| :::..|.||     :.|.:...          ...
Human   134 STTARVITNQYNNPAGLYSSENISNFNNALESKTAASGV-----EANSRPLDHAQPPSSLVIDKE 193

  Fly   200 SEVLKFLREEETGQSTPAFGNSHYEHDAPQQLQQPQQQYN-----QHQQHYHQQQQQQQSSTTRH 259
            |||.|.|:|:                   |:|.:|.:|..     |......::....:.|..|.
Human   194 SEVYKMLQEK-------------------QELNEPPKQSTSFLVLQEILESEEKGDPNKPSGFRS 239

  Fly   260 VSAPV--------NSPKPPSTGGLPTGQNICTECERLITGVFVRIKDKNLHVECFKCATCGTSLK 316
            |.|||        |:.|.|          :|.:|...|.||||:::|::.|.||:.|..|||:||
Human   240 VKAPVTKVAASIGNAQKLP----------MCDKCGTGIVGVFVKLRDRHRHPECYVCTDCGTNLK 294

  Fly   317 NQGYYNFNNKLYCDIHAKQAAINNPPTGTEGYVPVPIKP 355
            .:|::...:::||:.||::..  .||   |||..|.:.|
Human   295 QKGHFFVEDQIYCEKHARERV--TPP---EGYEVVTVFP 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_ZASP52-like 8..88 CDD:467281 28/69 (41%)
DUF4749 150..>218 CDD:464948 20/78 (26%)
LIM_ALP_like 282..333 CDD:188746 20/50 (40%)
PHA03247 <762..1006 CDD:223021
LIM1_Enigma_like_1 2020..2073 CDD:188839
LIM 2081..2132 CDD:259829
LIM3_Enigma_like_1 2140..2193 CDD:188845
PDLIM1NP_066272.1 PDZ_PDLIM-like 6..83 CDD:467235 28/69 (41%)
DUF4749 138..231 CDD:464948 25/116 (22%)
LIM_CLP36 260..311 CDD:188832 20/50 (40%)
Blue background indicates that the domain is not in the aligned region.

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