DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp52 and PDLIM4

DIOPT Version :9

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:NP_003678.2 Gene:PDLIM4 / 8572 HGNCID:16501 Length:330 Species:Homo sapiens


Alignment Length:357 Identity:107/357 - (29%)
Similarity:153/357 - (42%) Gaps:56/357 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQPGDAVVKINDVDVFNLRHKDAQDIVVRSGNNF 82
            ||||||.||.||:.||.:.:|:|||.:..|.|.|||.:..||......:.|.:||:.:....::.
Human    12 PWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKGCHDHL 76

  Fly    83 VITVQR-GGSTWRPHVTPTGNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDG 146
            .::|.| .|.:|            |::|    ....:.||:......|..|....:|..|..|.|
Human    77 TLSVSRPEGRSW------------PSAP----DDSKAQAHRIHIDPEIQDGSPTTSRRPSGTGTG 125

  Fly   147 ---GVKSIVNKQYNTP--VGIYSDESIAETLSAQAEVL-------AGGVLGVNFKKNEKEYQGDR 199
               |..|: ...|..|  ..:..:.|...||.||...|       |....|:...::.:...|  
Human   126 PEDGRPSL-GSPYGQPPRFPVPHNGSSEATLPAQMSTLHVSPPPSADPARGLPRSRDCRVDLG-- 187

  Fly   200 SEVLKFLREEETGQSTPAFGNSHYEHDAPQQLQQPQQQYNQHQQHYHQQQQQQQSSTTRHVSAPV 264
            |||.:.|||       ||      |..|.:..|....:|.|......:..........|::....
Human   188 SEVYRMLRE-------PA------EPVAAEPKQSGSFRYLQGMLEAGEGGDWPGPGGPRNLKPTA 239

  Fly   265 NSPKPPSTG--GLPTGQNICTECERLITGVFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKL 327
            :....|.:|  |||.    ||.|...|.|..|:.:||..|.|||.|:.||.:||.:||:..:.:|
Human   240 SKLGAPLSGLQGLPE----CTRCGHGIVGTIVKARDKLYHPECFMCSDCGLNLKQRGYFFLDERL 300

  Fly   328 YCDIHAKQAAINNPPTGTEGYVPVPIKPNTKL 359
            ||:.|||  |...||   |||..|.:.||.|:
Human   301 YCESHAK--ARVKPP---EGYDVVAVYPNAKV 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_signaling 6..87 CDD:238492 26/68 (38%)
DUF4749 150..>217 CDD:292558 18/75 (24%)
LIM_ALP_like 282..333 CDD:188746 22/50 (44%)
LIM1_Enigma_like_1 2020..2073 CDD:188839
LIM 2081..2132 CDD:259829
LIM3_Enigma_like_1 2140..2193 CDD:188845
PDLIM4NP_003678.2 PDZ_signaling 2..80 CDD:238492 26/67 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..180 18/76 (24%)
DUF4749 148..220 CDD:406377 22/86 (26%)
LIM_RIL 255..307 CDD:188835 23/51 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 61 1.000 Domainoid score I10447
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7397
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24214
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.860

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