DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp52 and Tgfb1i1

DIOPT Version :9

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:XP_006230411.1 Gene:Tgfb1i1 / 84574 RGDID:620173 Length:473 Species:Rattus norvegicus


Alignment Length:478 Identity:139/478 - (29%)
Similarity:189/478 - (39%) Gaps:101/478 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  1738 TGFV-ASQAKRLSCMEEEISSLTSQSQAISARASALGEGCFPNLRSPTFDSKFPLKPAPAESIVP 1801
            |||| |||...||.:|...|.:           |.||                    ||.|.   
  Rat     9 TGFVLASQDALLSDLETTTSHM-----------SRLG--------------------APKER--- 39

  Fly  1802 GYATVPAATKMLTAPPPGFLQQQQQQQQRSAFSGYQATTSSVQQSSFASSSKATTSSLSSSSASA 1866
                 |..|  ||.|||               .|:|..|.| .:||.||..|   ..|.|:....
  Rat    40 -----PPET--LTPPPP---------------YGHQPQTGS-GESSGASGDK---DHLYSTVCKP 78

  Fly  1867 SASASVARSSQSLTQASAITTTTNNQATTAYRSSNG---SITKPNLASRPSI------------- 1915
            .:..|||..:...:.:|.:......:.....:..|.   :||...::..||.             
  Rat    79 RSPKSVAPVAPPFSSSSGVLGNGLCELDRLLQELNATQFNITDEIMSQFPSSKMAEGEGKEDQSE 143

  Fly  1916 -ASITAPGSASAPAP-VPSAAPTKATAPFKAPIVPKS--VIANAVNAAAPPAPAVFPPDLSDLNL 1976
             .|||...|::.||| .|||  |.||......:...|  .:.|.:.|:.||.|....|      .
  Rat   144 DKSITTVPSSTFPAPSKPSA--TSATQELDRLMASLSDFRVQNHLPASGPPQPPAVSP------T 200

  Fly  1977 NSNVDNSPGAGGKSA--GAFGATSAPKRGRGILNKAAGPGVRIPLCNSCNVQIRGPFITALGRIW 2039
            .....:.||...|.:  ...|...:....||:..:|.|      ||.|||..|.|..:|||||.|
  Rat   201 REGCPSPPGQTNKGSLDTMLGLLQSDLSRRGVPTQAKG------LCGSCNKPIAGQVVTALGRAW 259

  Fly  2040 CPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPEC 2104
            .|:||:|  ..|...|....|.|:.|..:|..|:.:..:|.|..|...|:...:.|:|.|:|||.
  Rat   260 HPEHFLC--RGCSTTLGGSSFFEKDGAPFCPECYFERFSPRCGFCNQPIRHKMVTALGTHWHPEH 322

  Fly  2105 FTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCT 2169
            |.|..||:.||...|...:|..||..|:.:||..:|..|..|:.  |.::.||:..:|..||.|.
  Rat   323 FCCVSCGEPFGEEGFHEREGRPYCRRDFLQLFAPRCQGCQGPIL--DNYISALSALWHPDCFVCR 385

  Fly  2170 FCKQNLEGQSFYNKGGRPFCKNH 2192
            .|.....|.||:...|||.|:||
  Rat   386 ECLAPFSGGSFFEHEGRPLCENH 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_signaling 6..87 CDD:238492
DUF4749 150..>217 CDD:292558
LIM_ALP_like 282..333 CDD:188746
LIM1_Enigma_like_1 2020..2073 CDD:188839 22/52 (42%)
LIM 2081..2132 CDD:259829 19/50 (38%)
LIM3_Enigma_like_1 2140..2193 CDD:188845 20/53 (38%)
Tgfb1i1XP_006230411.1 Paxillin <69..>118 CDD:281527 7/48 (15%)
LIM1_Paxillin_like 240..292 CDD:259830 23/53 (43%)
LIM2_Paxillin_like 299..350 CDD:188723 19/50 (38%)
LIM3_Paxillin 358..410 CDD:188793 20/53 (38%)
LIM4_Leupaxin 417..468 CDD:188796
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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