DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zasp52 and shox

DIOPT Version :9

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:XP_005167911.1 Gene:shox / 664748 ZFINID:ZDB-GENE-051030-21 Length:304 Species:Danio rerio


Alignment Length:375 Identity:70/375 - (18%)
Similarity:124/375 - (33%) Gaps:150/375 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly  1617 EQSSQSASQSYNQQPERITEQRVGNLNIQQRE--QS--SQLQQQAQSQTQSQTRSQVGNT----- 1672
            |:.:...|:|::|:.:..:::     :|..||  :|  ::.::...|:|..|..::..|.     
Zfish     2 EELTAFVSKSFDQKTKESSKE-----SITYREVLESGLARARELGNSETNLQEITETNNNHCPVH 61

  Fly  1673 ----QIERRRKVTEEFERTQSAKTIEIRTGSQSVSQSKAQSQSISQAQTQAQSQSQNQSDTERRS 1733
                .:|..::..:||..|::         |..:...|.:.:.:......|||:.:     :|||
Zfish    62 LYKEHVELEKEKLKEFSVTRA---------SDGIYDCKDKKEDVKSEDEDAQSKLK-----QRRS 112

  Fly  1734 SYGKTGFVASQAKRL-----------SCMEEEISSLTSQSQA----------------------- 1764
               :|.|...|...|           :.|.||:|.....|:|                       
Zfish   113 ---RTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKG 174

  Fly  1765 -ISARASALGEGC----FPNLRSPTFDSKFPLKPAPAESIVPGYAT---------VPAATKMLTA 1815
             |...||.| :.|    :.|:.:    .:.|.:...|:..:.|..|         :.|....|..
Zfish   175 VILGTASHL-DACRVAPYVNMGA----LRMPFQQVQAQLQLEGVGTHSHPHLHPHLAAHAPYLMF 234

  Fly  1816 PPPGFLQQQQQQQQRSAFSGYQATTSSVQQSSFASSSKATTSSLSSSSASASASASVARSSQSLT 1880
            |||.|                                   ...::|.:.||||:|:|..:::|  
Zfish   235 PPPPF-----------------------------------GLPIASLADSASAAAAVVAAAKS-- 262

  Fly  1881 QASAITTTTNNQATTAYRSSNGSITKPNLAS--------RPSIASITAPG 1922
                             .|.|.||....|.:        .|..|.|||||
Zfish   263 -----------------NSKNSSIADLRLKAGLLGGHWLSPFQAQITAPG 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_signaling 6..87 CDD:238492
DUF4749 150..>217 CDD:292558
LIM_ALP_like 282..333 CDD:188746
LIM1_Enigma_like_1 2020..2073 CDD:188839
LIM 2081..2132 CDD:259829
LIM3_Enigma_like_1 2140..2193 CDD:188845
shoxXP_005167911.1 Homeobox 112..165 CDD:278475 11/55 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6207
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

Return to query results.
Submit another query.