DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp52 and pdlim4

DIOPT Version :10

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:NP_001036161.1 Gene:pdlim4 / 569404 ZFINID:ZDB-GENE-070308-5 Length:349 Species:Danio rerio


Alignment Length:377 Identity:115/377 - (30%)
Similarity:166/377 - (44%) Gaps:77/377 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQPGDAVVKINDVDVFNLRHKDAQDIVVRSGNNF 82
            ||||||.||.||:.||.:.::...|.:.|:.|.|||.::.||.....::.|.:||:.:....:..
Zfish    12 PWGFRLVGGRDFSTPLTISRITPASKAAQSNLSPGDTILAINGESTESMTHMEAQNRIKACTDQL 76

  Fly    83 VITVQRGGSTWRPHVTPTGNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYN------------N 135
            |:.:.|.|..|    :|||......||:..|:...|     |..:.|..||:            .
Zfish    77 VLAICRSGKAW----SPTGMEELKTSPFSPTLESDS-----QTFRPISSGYSPTPKSPSPKSPIT 132

  Fly   136 AARPFSNGGDGGVKSIVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLG----------VNFKK 190
            .|.|::|||...|       ||.|.|:||..:....|..|   ::|..||          ||...
Zfish   133 GAVPYNNGGSRPV-------YNNPAGLYSHNNGNGALPKQ---MSGLSLGSPHSFSPEPPVNSSG 187

  Fly   191 NEKEYQGDRSEVLKFLREEETGQSTPAFGNSHYEHDAPQQLQQPQQQYNQHQQHYHQQQQQQQS- 254
            |...:. .:|:|.:.|.:.|...|.|....|.                 ::.|...:.:....| 
Zfish   188 NRNGFD-TQSDVYRMLLDYEEPVSAPKQSGSF-----------------KYLQGILEAEDGGVSP 234

  Fly   255 ---STTRHVSAPVNSPKP----PSTGGL---PTGQNI--CTECERLITGVFVRIKDKNLHVECFK 307
               |..|.:.:||.||.|    |.|..|   |..||:  ||.|...|.||.|:.:||..|.:||.
Zfish   235 VDRSGVRGLRSPVKSPVPKLGSPITAPLAPIPGLQNLPQCTRCANGIVGVIVKARDKLYHPDCFM 299

  Fly   308 CATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNPPTGTEGYVPVPIKPNTKL 359
            |..||.:||.:||:..::.|||:.|||  |...||   |||..|.:.||:|:
Zfish   300 CDDCGLNLKQRGYFFIDDNLYCETHAK--ARVQPP---EGYDVVAVYPNSKV 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_ZASP52-like 8..88 CDD:467281 24/69 (35%)
DUF4749 150..>218 CDD:464948 20/77 (26%)
LIM_ALP_like 282..333 CDD:188746 22/50 (44%)
PHA03247 <762..1006 CDD:223021
LIM1_Enigma_like_1 2020..2073 CDD:188839
LIM 2081..2132 CDD:259829
LIM3_Enigma_like_1 2140..2193 CDD:188845
pdlim4NP_001036161.1 PDZ_PDLIM-like 4..82 CDD:467235 24/69 (35%)
DUF4749 146..231 CDD:464948 22/105 (21%)
LIM_RIL 274..326 CDD:188835 23/51 (45%)
Blue background indicates that the domain is not in the aligned region.

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