DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zasp52 and fhl3a

DIOPT Version :10

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:XP_021330031.1 Gene:fhl3a / 567097 ZFINID:ZDB-GENE-030131-4741 Length:279 Species:Danio rerio


Alignment Length:189 Identity:50/189 - (26%)
Similarity:79/189 - (41%) Gaps:18/189 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly  2019 LCNSC--------------NVQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYC 2069
            |||.|              .|......:...|..|....|||  .:|::|:....|:.:|.|.||
Zfish    88 LCNDCYCNEFSSKCVACDKTVMPGTRKLEYAGSTWHEGCFIC--NSCQQPIGSKSFIPDKDDHYC 150

  Fly  2070 EYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDGNAYCEADWNE 2134
            ..|:|...||.|::|...:....:....:.:|.|||.|..|......:.|...|.:.||...:..
Zfish   151 VPCYENKFAPRCTRCKQALAKGGVTYRDEPWHKECFVCTSCKVQLAGQHFTSRDDSPYCIKCFGN 215

  Fly  2135 LFTTKCFACGFPVE--AGDRWVEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKN 2191
            |:..||.||..|:.  .|.:::...:..:|..||.|:.|..:|.|..|:.:.....|:|
Zfish   216 LYAKKCEACNKPITGFGGGKYISFEDRQWHQPCFTCSRCSVSLVGAGFFPEQDEILCRN 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_ZASP52-like 8..88 CDD:467281
DUF4749 150..>218 CDD:464948
LIM_ALP_like 282..333 CDD:188746
PHA03247 <762..1006 CDD:223021
LIM1_Enigma_like_1 2020..2073 CDD:188839 16/66 (24%)
LIM 2081..2132 CDD:259829 12/50 (24%)
LIM3_Enigma_like_1 2140..2193 CDD:188845 15/54 (28%)
fhl3aXP_021330031.1 LIM <5..33 CDD:413332
LIM1_FHL3 36..94 CDD:188807 4/5 (80%)
LIM2_FHL3 98..155 CDD:188811 14/58 (24%)
LIM3_FHL 162..213 CDD:188732 12/50 (24%)
LIM4_FHL3 221..276 CDD:188818 15/54 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.