DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp52 and lpxn

DIOPT Version :9

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:XP_689239.4 Gene:lpxn / 560743 ZFINID:ZDB-GENE-081105-159 Length:405 Species:Danio rerio


Alignment Length:359 Identity:100/359 - (27%)
Similarity:145/359 - (40%) Gaps:72/359 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1876 SQSLTQAS------AITTTTNNQATTAYRSSNGSITKPNLASRPSIASITAPGSA-SAPAPVPSA 1933
            :|:.::||      ...|..||..|...::.:.|:             |..|... ..|..||  
Zfish    12 AQNSSEASDPPVLLPAKTLKNNNTTVLQQTESSSL-------------IAGPRQTFDNPYSVP-- 61

  Fly  1934 APTKATAPFKAPIVPKSVIANAVNA-----------AAPPAPAVFPPDLSDLNLNSNVDNSPGAG 1987
                 |||.:|.::........:::           .:.|||:..||.|:..::.:......|..
Zfish    62 -----TAPVEASLMSPRTATRELDSLMNDLLGLDLEVSEPAPSSNPPPLARKSIKAKTTEETGES 121

  Fly  1988 GK------------------SAGA------FGATSAPKRGRGILNKAAGPGVRIPLCNSCNVQIR 2028
            |.                  |.|.      .|:.|:.....|:...|.|.      |.||...|.
Zfish   122 GSGRQEGDRKPQHPPLSEKFSKGVDAIDDLLGSLSSDMEKMGVRTAAKGH------CASCGKCIA 180

  Fly  2029 GPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCL 2093
            |..|||||::|.|:||:|  ..||..|...||.|..|..|||..::|..:|.|:.|.|.|..:.|
Zfish   181 GKMITALGQVWHPEHFVC--SACREELGTCGFFERDGKPYCEKDYQKLFSPRCAYCKGPITQNIL 243

  Fly  2094 NAIGKHFHPECFTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRWVEALN 2158
            .|:.:.:|||.|.|..||.:||...:...||..||..|:..||..||..||.||:  :.::.|.|
Zfish   244 TAMDQTWHPEHFFCCHCGDLFGPEGYLERDGKPYCSRDFYCLFAPKCSGCGEPVK--ENYLSAAN 306

  Fly  2159 HNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNH 2192
            ..:|..||.|:.|.:......|....|||.|..|
Zfish   307 GTWHPDCFVCSDCLKPFTDGCFLELNGRPLCSLH 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_signaling 6..87 CDD:238492
DUF4749 150..>217 CDD:292558
LIM_ALP_like 282..333 CDD:188746
LIM1_Enigma_like_1 2020..2073 CDD:188839 25/52 (48%)
LIM 2081..2132 CDD:259829 19/50 (38%)
LIM3_Enigma_like_1 2140..2193 CDD:188845 18/53 (34%)
lpxnXP_689239.4 LIM1_Paxillin_like 172..224 CDD:259830 25/53 (47%)
LIM2_Leupaxin 231..282 CDD:188792 19/50 (38%)
LIM3_Leupaxin 290..342 CDD:188794 18/53 (34%)
LIM4_Leupaxin 349..400 CDD:188796
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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