DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zasp52 and pdlim2

DIOPT Version :9

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:NP_001313331.1 Gene:pdlim2 / 560322 ZFINID:ZDB-GENE-070308-4 Length:364 Species:Danio rerio


Alignment Length:372 Identity:91/372 - (24%)
Similarity:151/372 - (40%) Gaps:91/372 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQPGDAVVKINDVDVFNLRHKDAQDIVVRSGNNF 82
            |||||:.||.||.:.:.|.||||||.:|.|.|||||.:::||.:....:.:.:||:.:.......
Zfish    13 PWGFRISGGRDFKKAITVSKVNAGSKAETACLQPGDIIMEINGLSAGEMLNVEAQNKIKCCTTQL 77

  Fly    83 VITVQR---------GGSTWR---------------------------PHVTPTGNVPQ-PNSPY 110
            .:.|:|         .|.|.:                           ..::|....|: |:||.
Zfish    78 QLLVERPAPPTPGQTNGITEQLVGRFQEAVQVSRDENQNYKEYTISSPASLSPGPYTPEPPSSPD 142

  Fly   111 LQ----TVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKSI------VNKQYNTPVGIYSD 165
            .:    |.|..||......|:......:..:||.|.    ...|:      |:.:..||.|.||.
Zfish   143 RRGGRITPTNKSLQFHSWSSEEKNVQSHRLSRPLSQ----EFSSLDFRSNCVSSRTPTPPGQYSP 203

  Fly   166 ESIAETLSAQAEVLAGGVLGVNFKKNE----KEYQGDRSEVLKFLREEETGQSTPAFGNSHYEHD 226
            .|..|.           .|.|:.:::.    :::..| |||.|.::|.:..::.|          
Zfish   204 HSPIER-----------ELSVSPRRSSDFAMQKFDRD-SEVYKMIQENKESRAAP---------- 246

  Fly   227 APQQLQQPQQQYNQHQQHYHQQQQQQQSSTTRHVSAPVNSPKPPSTGGLPTGQ--NICTECERLI 289
                     :|.|..:......:..::.:..|..|.  .||.||.|..:...|  :.|.:|...|
Zfish   247 ---------RQSNTFKMLQEVLEADEKEAALRFPSK--LSPNPPKTSSVAGVQKHHTCEKCGTSI 300

  Fly   290 TGVFVRIKDK-NLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQ 335
            ....|:|.|. ..|.||:.|..||.:||.:|::...:|::|:.||::
Zfish   301 VTQAVKITDNCYRHPECYTCTECGLNLKMRGHFWAEDKMFCEKHARE 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_signaling 6..87 CDD:238492 27/68 (40%)
DUF4749 150..>217 CDD:292558 17/76 (22%)
LIM_ALP_like 282..333 CDD:188746 17/51 (33%)
LIM1_Enigma_like_1 2020..2073 CDD:188839
LIM 2081..2132 CDD:259829
LIM3_Enigma_like_1 2140..2193 CDD:188845
pdlim2NP_001313331.1 PDZ_signaling 3..82 CDD:238492 27/68 (40%)
DUF4749 <226..264 CDD:292558 9/57 (16%)
LIM_Mystique 293..345 CDD:188833 17/51 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583714
Domainoid 1 1.000 66 1.000 Domainoid score I9898
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24214
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.840

Return to query results.
Submit another query.