DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp52 and Pdlim1

DIOPT Version :10

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:NP_058557.2 Gene:Pdlim1 / 54132 MGIID:1860611 Length:327 Species:Mus musculus


Alignment Length:356 Identity:111/356 - (31%)
Similarity:166/356 - (46%) Gaps:64/356 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQPGDAVVKINDVDVFNLRHKDAQDIVVRSGNNF 82
            ||||||.||.||.|||.:.:|..||.:..|.|..||.:..|:..|..::.|.:||:.:....:|.
Mouse    13 PWGFRLVGGKDFEQPLAISRVTPGSKAAIANLCIGDLITAIDGEDTSSMTHLEAQNKIKGCADNM 77

  Fly    83 VITVQRG-GSTWRPHVTPTGNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDG 146
            .:||.|. ...|.|.||..|.    ..||     |.:||.:.|:..|||..:|.:|.||:.....
Mouse    78 TLTVSRSEQKIWSPLVTEEGK----RHPY-----KMNLASEPQEVLHIGSAHNRSAMPFTASPAP 133

  Fly   147 GVKSIVNKQYNTPVGIYSDESIAETLSA-QAEVLAGGVLGVNFKKNEKEYQG----DR-SEVLKF 205
            ..:.|.| |||:|.|:||.|:|:...:| :::..|.|....:....:....|    |: |||.|.
Mouse   134 STRVITN-QYNSPTGLYSSENISNFNNAVESKTSASGEEANSRPVVQPHPSGSLIIDKDSEVYKM 197

  Fly   206 LREEETGQSTPAFGNSHYEHDAPQQLQQPQQQYN-----QHQQHYHQQQQQQQSSTTRHVSAPV- 264
            |:|:                   |:|.:|.:|..     |.......:....:.|..|.|.||| 
Mouse   198 LQEK-------------------QELNEPPKQSTSFLVLQEILESDGKGDPNKPSGFRSVKAPVT 243

  Fly   265 -------NSPKPPSTGGLPTGQNICTECERLITGVFVRIKDKNLHVECFKCATCGTSLKNQGYYN 322
                   |:.|.|          ||.:|...|.||||:::|.:.|.||:.|..||.:||.:|::.
Mouse   244 KVAASVGNAQKLP----------ICDKCGTGIVGVFVKLRDHHRHPECYVCTDCGINLKQKGHFF 298

  Fly   323 FNNKLYCDIHAKQAAINNPPTGTEGYVPVPI 353
            ..:::||:.||::..  .||   |||..|.:
Mouse   299 VEDQIYCEKHARERV--TPP---EGYDVVTV 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_ZASP52-like 8..88 CDD:467281 28/69 (41%)
DUF4749 150..>218 CDD:464948 22/73 (30%)
LIM_ALP_like 282..333 CDD:188746 19/50 (38%)
PHA03247 <762..1006 CDD:223021
LIM1_Enigma_like_1 2020..2073 CDD:188839
LIM 2081..2132 CDD:259829
LIM3_Enigma_like_1 2140..2193 CDD:188845
Pdlim1NP_058557.2 PDZ_PDLIM-like 6..83 CDD:467235 28/69 (41%)
DUF4749 136..232 CDD:464948 27/115 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 161..184 2/22 (9%)
LIM_CLP36 258..309 CDD:188832 19/50 (38%)
Blue background indicates that the domain is not in the aligned region.

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