DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp52 and Pdlim1

DIOPT Version :9

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:NP_058557.2 Gene:Pdlim1 / 54132 MGIID:1860611 Length:327 Species:Mus musculus


Alignment Length:356 Identity:111/356 - (31%)
Similarity:166/356 - (46%) Gaps:64/356 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQPGDAVVKINDVDVFNLRHKDAQDIVVRSGNNF 82
            ||||||.||.||.|||.:.:|..||.:..|.|..||.:..|:..|..::.|.:||:.:....:|.
Mouse    13 PWGFRLVGGKDFEQPLAISRVTPGSKAAIANLCIGDLITAIDGEDTSSMTHLEAQNKIKGCADNM 77

  Fly    83 VITVQRG-GSTWRPHVTPTGNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDG 146
            .:||.|. ...|.|.||..|.    ..||     |.:||.:.|:..|||..:|.:|.||:.....
Mouse    78 TLTVSRSEQKIWSPLVTEEGK----RHPY-----KMNLASEPQEVLHIGSAHNRSAMPFTASPAP 133

  Fly   147 GVKSIVNKQYNTPVGIYSDESIAETLSA-QAEVLAGGVLGVNFKKNEKEYQG----DR-SEVLKF 205
            ..:.|.| |||:|.|:||.|:|:...:| :::..|.|....:....:....|    |: |||.|.
Mouse   134 STRVITN-QYNSPTGLYSSENISNFNNAVESKTSASGEEANSRPVVQPHPSGSLIIDKDSEVYKM 197

  Fly   206 LREEETGQSTPAFGNSHYEHDAPQQLQQPQQQYN-----QHQQHYHQQQQQQQSSTTRHVSAPV- 264
            |:|:                   |:|.:|.:|..     |.......:....:.|..|.|.||| 
Mouse   198 LQEK-------------------QELNEPPKQSTSFLVLQEILESDGKGDPNKPSGFRSVKAPVT 243

  Fly   265 -------NSPKPPSTGGLPTGQNICTECERLITGVFVRIKDKNLHVECFKCATCGTSLKNQGYYN 322
                   |:.|.|          ||.:|...|.||||:::|.:.|.||:.|..||.:||.:|::.
Mouse   244 KVAASVGNAQKLP----------ICDKCGTGIVGVFVKLRDHHRHPECYVCTDCGINLKQKGHFF 298

  Fly   323 FNNKLYCDIHAKQAAINNPPTGTEGYVPVPI 353
            ..:::||:.||::..  .||   |||..|.:
Mouse   299 VEDQIYCEKHARERV--TPP---EGYDVVTV 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_signaling 6..87 CDD:238492 27/68 (40%)
DUF4749 150..>217 CDD:292558 22/72 (31%)
LIM_ALP_like 282..333 CDD:188746 19/50 (38%)
LIM1_Enigma_like_1 2020..2073 CDD:188839
LIM 2081..2132 CDD:259829
LIM3_Enigma_like_1 2140..2193 CDD:188845
Pdlim1NP_058557.2 PDZ_signaling 5..81 CDD:238492 26/67 (39%)
DUF4749 136..228 CDD:292558 27/111 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 161..184 2/22 (9%)
LIM_CLP36 258..309 CDD:188832 19/50 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839627
Domainoid 1 1.000 61 1.000 Domainoid score I10388
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24214
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6207
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.870

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