DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp52 and Pdlim3

DIOPT Version :9

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:NP_001361581.1 Gene:Pdlim3 / 53318 MGIID:1859274 Length:364 Species:Mus musculus


Alignment Length:396 Identity:109/396 - (27%)
Similarity:160/396 - (40%) Gaps:103/396 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQPGDAVVKINDVDVFNLRHKDAQDIVVRSGNNF 82
            ||||||.||.||.|||::.::..||.:..|.|.|||.::.|:.....::.|.||||.:..:....
Mouse    12 PWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQL 76

  Fly    83 VITVQRGGS-TWRPHVTPTGNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPF-----S 141
            .:.:.|..: .|.|.|:..|..    .|:     |.:|..:.||..:....:|...:||     :
Mouse    77 CLKIDRAETRLWSPQVSEDGKA----HPF-----KINLEAEPQDVNYFEHKHNIRPKPFIIPGRT 132

  Fly   142 NG---------GDG-----------------------------------GVKSIVNKQYNTPVGI 162
            :|         |.|                                   ||| ||:.|:|||:.:
Mouse   133 SGCSTPSGVDCGSGRSTPSSVSTVSTICPGDLKVAAKMAPNIPLEMELPGVK-IVHAQFNTPMQL 196

  Fly   163 YSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQ-GDRSEVLKFLREEETGQSTPAFGNS----- 221
            |||::|.|||..|...    .||.....:|.... ..:|:|.:.|.:.....:.|....|     
Mouse   197 YSDDNIMETLQGQVAT----ALGETSSMSEPTASVPPQSDVYRMLHDNRDDPAAPRQSGSFRVLQ 257

  Fly   222 HYEHDAPQQLQQPQQQYNQHQQHYHQQQQQQQSSTTRHVSAPVNSPKPPSTGGLPTGQN--ICTE 284
            ...:|.|                      ..:.:.||.|.|||....    ||..:.|.  :|.:
Mouse   258 DLVNDGP----------------------DDRPAGTRSVRAPVTKVH----GGAGSAQRMPLCDK 296

  Fly   285 CERLITGVFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNPPTGTEGYV 349
            |...|.|..|:.:||..|.|||.||.|..:||.:||:....:|||:.||:  |...||   |||.
Mouse   297 CGSGIVGAVVKARDKYRHPECFVCADCNLNLKQKGYFFVEGELYCETHAR--ARTRPP---EGYD 356

  Fly   350 PVPIKP 355
            .|.:.|
Mouse   357 TVTLYP 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_signaling 6..87 CDD:238492 26/68 (38%)
DUF4749 150..>217 CDD:292558 20/67 (30%)
LIM_ALP_like 282..333 CDD:188746 21/50 (42%)
LIM1_Enigma_like_1 2020..2073 CDD:188839
LIM 2081..2132 CDD:259829
LIM3_Enigma_like_1 2140..2193 CDD:188845
Pdlim3NP_001361581.1 PDZ_signaling 2..80 CDD:238492 26/67 (39%)
DUF4749 184..268 CDD:374237 25/110 (23%)
LIM_ALP 294..346 CDD:188834 22/51 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 61 1.000 Domainoid score I10388
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24214
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6207
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.940

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