DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp52 and pxna

DIOPT Version :9

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:NP_963882.1 Gene:pxna / 399546 ZFINID:ZDB-GENE-040105-1 Length:533 Species:Danio rerio


Alignment Length:495 Identity:128/495 - (25%)
Similarity:202/495 - (40%) Gaps:91/495 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1755 ISSLTSQSQAISARASAL----------GEGCFPNLRSPTFDSKFP--LKPAPAESIVPGYATVP 1807
            ::.|.|.:..||.:...|          |...:.::.||      |  :.| |||::...:...|
Zfish     8 LADLESTTSHISKQGVFLPEETPYSCPRGSDSYQDVSSP------PRVISP-PAETLNGSWVEKP 65

  Fly  1808 ----AATKMLTAPPPGFLQQQQQQQQRSAFSGYQATTSSVQQSSFASSSKATTSSLSSSSASASA 1868
                ::|:...:.|.....:..|.::...:|      ...:|.|..|.:....|||.|       
Zfish    66 ESKHSSTQSFNSAPKSSSPRVSQSEEEHVYS------FPNKQKSIESPTAVMNSSLGS------- 117

  Fly  1869 SASVARSSQSLTQASAITTTTNN------------QATTAYRSSNG----------SITKP--NL 1909
              :::...:.|.:.:|:..:|.:            ..|..|...||          .|.||  |:
Zfish   118 --NLSELDRLLLELNAVQHSTPSFPAEETYPPKPASNTQRYVPENGVSSVVKAAPPKIEKPKRNI 180

  Fly  1910 AS------RPSIASITAPGSASAPAPVP-SAAPTKATAPFKAPIVPKSVIANAVNAAAPPAPAVF 1967
            .:      |||:.|:.....:|.||.|| |:.|..:.........|....|....::|.......
Zfish   181 PAKVIEEVRPSVESLLNQLESSVPAAVPVSSVPMVSELRGVQEETPAQQQARISASSATRELDEL 245

  Fly  1968 PPDLSDLNLNSNVDNSPGAGGKSAGAFGATSAPKRGRGI----------LNKAAGPGVRIPLCNS 2022
            ...|||..:.||:    .|.|||:    .||.||:|..:          ||:.....|...:|.:
Zfish   246 MASLSDFKVQSNI----MAQGKSS----PTSVPKQGNKLDNMLGSLQSDLNRLGVQTVAKGVCGA 302

  Fly  2023 CNVQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGK 2087
            |...|.|..:||:||.|.|:||:|.  .|:..:....|.|..|..|||..:....:|.|..|:|.
Zfish   303 CKKPIAGQVVTAMGRTWHPEHFVCT--QCQEEIGSRNFFERDGQPYCEKDYHSLFSPRCYYCSGP 365

  Fly  2088 IKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDR 2152
            |....:.|:.|.:|||.|.|.|||..||...|..::|.|||..|:.::|..||..|...:.  :.
Zfish   366 ILDKVVTALDKTWHPEHFFCAQCGSFFGPEGFHEKEGKAYCRKDYFDMFAPKCGGCARAIL--EN 428

  Fly  2153 WVEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNH 2192
            ::.|||..:|.:||.|..|.......||:...|:|:|:.|
Zfish   429 YISALNSLWHPECFVCRECFTPFVNGSFFEHEGQPYCEAH 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_signaling 6..87 CDD:238492
DUF4749 150..>217 CDD:292558
LIM_ALP_like 282..333 CDD:188746
LIM1_Enigma_like_1 2020..2073 CDD:188839 20/52 (38%)
LIM 2081..2132 CDD:259829 21/50 (42%)
LIM3_Enigma_like_1 2140..2193 CDD:188845 16/53 (30%)
pxnaNP_963882.1 Paxillin 54..229 CDD:281527 37/189 (20%)
LIM1_Paxillin_like 300..352 CDD:259830 20/53 (38%)
LIM2_Paxillin 359..410 CDD:188791 21/50 (42%)
LIM3_Paxillin 418..470 CDD:188793 16/53 (30%)
LIM4_Paxillin 477..528 CDD:188795
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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