DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp52 and pdlim4

DIOPT Version :10

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:NP_989251.1 Gene:pdlim4 / 394862 XenbaseID:XB-GENE-1001790 Length:332 Species:Xenopus tropicalis


Alignment Length:372 Identity:105/372 - (28%)
Similarity:169/372 - (45%) Gaps:64/372 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LQIKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQPGDAVVKINDVDVFNLRHKDA 71
            |.:.||  ...||||||.||.|:..||.:.|:|.||.:|.|.|.|||.:::||..:..|:.|..|
 Frog     3 LSVTLS--GPSPWGFRLVGGRDYNTPLTISKINPGSKAELANLYPGDVILEINGENTENMNHLVA 65

  Fly    72 QDIVVRSGNNFVITV-QRGGSTWRPHVTPTGNVPQPNSPY-----LQTVTKTSLAHKQQDSQHIG 130
            |:.:....:..:::: :|.|.|    :.....:.:....|     ||.:..|.:...::.:    
 Frog    66 QNKIKACTDQLMLSINRRDGRT----LLNEEELKRQQRKYSLEAELQDIFPTEITQTRRSA---- 122

  Fly   131 CGYNNAARPFS-NGGDGGVKSIVNKQYNTPVGIY-SDESIAETLSA-QAEVLAGGVLGVN-FKKN 191
                    |.| .|.....:.|..:|||.|..:| ::.:|...||: .|.:.......|: |:..
 Frog   123 --------PVSPRGSPSDSRQIPLQQYNNPSKLYTNNNNIEANLSSHMARINLSSPQSVDPFRSV 179

  Fly   192 EKEYQG--DRSEVLKFLREEETGQSTPAFGNSHYEHDAPQQLQQPQQ----QYNQHQQHYHQQ-Q 249
            .|...|  ..|:|.|.|:                  |..:.:.||:|    :|.|......:. :
 Frog   180 PKSKNGIDTESDVYKMLQ------------------DYVEPVSQPKQSGSFKYLQDMLEAGENGE 226

  Fly   250 QQQQSSTTRHVSAPVNSPKPPSTGGLPTGQNI--CTECERLITGVFVRIKDKNLHVECFKCATCG 312
            :.::..::|::.:||:....|    ||..|.:  ||.|...|.|..|:.:||..|.|||.|..||
 Frog   227 KPERPPSSRNIKSPVSKLSSP----LPGLQMLPQCTRCGNGIVGTIVKARDKLYHPECFMCDDCG 287

  Fly   313 TSLKNQGYYNFNNKLYCDIHAKQAAINNPPTGTEGYVPVPIKPNTKL 359
            .:||.:||:....:|||:.|||:..  .||   |||..|.:.||.|:
 Frog   288 LNLKQRGYFFIEEQLYCETHAKERV--KPP---EGYDVVAVYPNAKV 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_ZASP52-like 8..88 CDD:467281 29/80 (36%)
DUF4749 150..>218 CDD:464948 18/72 (25%)
LIM_ALP_like 282..333 CDD:188746 22/50 (44%)
PHA03247 <762..1006 CDD:223021
LIM1_Enigma_like_1 2020..2073 CDD:188839
LIM 2081..2132 CDD:259829
LIM3_Enigma_like_1 2140..2193 CDD:188845
pdlim4NP_989251.1 PDZ_PDLIM-like 4..82 CDD:467235 29/79 (37%)
DUF4749 139..231 CDD:464948 23/109 (21%)
LIM_RIL 257..309 CDD:188835 23/51 (45%)
Blue background indicates that the domain is not in the aligned region.

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