DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp52 and pdlim1

DIOPT Version :9

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:XP_017950803.1 Gene:pdlim1 / 394527 XenbaseID:XB-GENE-1004691 Length:345 Species:Xenopus tropicalis


Alignment Length:370 Identity:115/370 - (31%)
Similarity:168/370 - (45%) Gaps:70/370 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQPGDAVVKINDVDVFNLRHKDAQDIVVRSGNNF 82
            ||||||.||.||.|||.:.:|..||.:..|.|..||.|:.|:..:...:.|.:||:.:....:..
 Frog    13 PWGFRLIGGKDFDQPLTISRVMPGSKAAVADLCIGDVVISIDGENTDGMTHLEAQNKIKGCEDEL 77

  Fly    83 VITVQRGGS-TWRPHVTPTGNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDG 146
            ::|:.|..| .|.|.|:..|   :|| ||     |.:||...|:.:.||..:|.:|.||:.....
 Frog    78 ILTINRVESKIWSPLVSEDG---KPN-PY-----KMNLASNPQELKQIGSAHNRSAMPFTAASAS 133

  Fly   147 GVKSIVNKQYNTPVGIYSDESI---------AETLSAQAEVLAG-GVLGVNFKKNEKEYQGDRSE 201
            ....::..|||.|.|:||.::|         ..|.|||....|. .....|.:..:||     ||
 Frog   134 STPKVITAQYNNPAGLYSSDNIENFNSALETKSTPSAQVPSKASEPTQPANTRHLDKE-----SE 193

  Fly   202 VLKFLREEETGQSTPAFGNSHYEHDAPQQLQQPQQQYNQH--QQHYHQQQQQQQSSTTRHVSAPV 264
            |.|.|:|.                   |:|.:|.:|....  .|...:..::....|....:.|:
 Frog   194 VYKMLQEN-------------------QELDEPPRQSASFLVLQEILETDEKDFEGTECLYTGPM 239

  Fly   265 NSP------KP--------PST---GGLPTGQN--ICTECERLITGVFVRIKDKNLHVECFKCAT 310
            ..|      ||        |:|   ..|.:||.  ||..|...|.||||:|:||..|.||:.|..
 Frog   240 ERPFIDAGEKPSGFRSVRAPTTKVAASLGSGQKLPICGHCGSGIVGVFVKIRDKPHHPECYVCTD 304

  Fly   311 CGTSLKNQGYYNFNNKLYCDIHAKQAAINNPPTGTEGYVPVPIKP 355
            ||.:||.:|::...:|:||:.||::..  .||   |||..|.:.|
 Frog   305 CGMNLKQKGHFFVEDKMYCEKHARERM--TPP---EGYDVVTVFP 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_signaling 6..87 CDD:238492 26/68 (38%)
DUF4749 150..>217 CDD:292558 22/76 (29%)
LIM_ALP_like 282..333 CDD:188746 22/50 (44%)
LIM1_Enigma_like_1 2020..2073 CDD:188839
LIM 2081..2132 CDD:259829
LIM3_Enigma_like_1 2140..2193 CDD:188845
pdlim1XP_017950803.1 PDZ_signaling 5..81 CDD:238492 25/67 (37%)
DUF4749 137..225 CDD:374237 27/111 (24%)
LIM_CLP36 276..327 CDD:188832 22/50 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 56 1.000 Domainoid score I10821
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24214
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6207
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.040

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