DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp52 and pdlim7

DIOPT Version :10

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:NP_957134.2 Gene:pdlim7 / 393813 ZFINID:ZDB-GENE-040426-2092 Length:427 Species:Danio rerio


Alignment Length:392 Identity:122/392 - (31%)
Similarity:189/392 - (48%) Gaps:64/392 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1836 YQATTSSVQQSSFASSSKATTSSLSSSSASASASASVARSSQSLTQASA------ITTTTNNQAT 1894
            :.|....:......:..:|.|.||..:.:.|...|. .....|||.:|:      ..:|..|:..
Zfish    62 FDANAEEMTHVEAQNKIRAATDSLKLTLSRAFHPAG-GEQKDSLTSSSSQPKYSFAPSTAINKMA 125

  Fly  1895 TAYRSSNGS-----ITKP-NLASRPSIASITAP--GSASAPAPV-----PSAAPTKATAPFKAPI 1946
            ..:.:|.||     :.|| :.|.:|:::|   |  |...||.||     |:.......||.|||:
Zfish   126 RPFSASPGSGSAGPVIKPVSYALKPALSS---PHNGHGVAPCPVTVKSKPADKHDAVQAPAKAPV 187

  Fly  1947 VPKSVIANAVNAAAPPAPAVFPPDLSDLNLNSNVDNSPGAG-----GKSAGAFGATSAPKRGRGI 2006
                          ...||..||.::|          ||..     .||:......:.|.:...:
Zfish   188 --------------SSGPACRPPWVTD----------PGFADRYHPDKSSTVVTQHTQPLQPTPM 228

  Fly  2007 LNKA----------AGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFV 2061
            .|::          |......|||.:|:..|||.::.||||.|.|:.|:|.  .|:|.|.:.||.
Zfish   229 QNRSSILQAAQQSPAHSSAATPLCAACSKIIRGRYVVALGRSWHPEEFMCC--QCKRLLDEGGFF 291

  Fly  2062 EEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDGNA 2126
            ||||.:||..|::...:|.|:||...|.|:.::|:...:|.:||.|..|.....|:.|::|:|..
Zfish   292 EEKGSIYCSKCYDNRYSPNCAKCKKIITGEIMHALKMTYHVQCFLCAACKLPIRNQAFYMEEGEP 356

  Fly  2127 YCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKN 2191
            |||.|:.::|.|||..|.|.::||||::|||.:::|..||.|..|:.||||::||:|..:|.||:
Zfish   357 YCERDYEKMFGTKCHGCDFKIDAGDRFLEALGYSWHDTCFVCAICQINLEGKTFYSKKDKPLCKS 421

  Fly  2192 HA 2193
            ||
Zfish   422 HA 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_ZASP52-like 8..88 CDD:467281
DUF4749 150..>218 CDD:464948
LIM_ALP_like 282..333 CDD:188746
PHA03247 <762..1006 CDD:223021
LIM1_Enigma_like_1 2020..2073 CDD:188839 24/52 (46%)
LIM 2081..2132 CDD:259829 18/50 (36%)
LIM3_Enigma_like_1 2140..2193 CDD:188845 25/52 (48%)
pdlim7NP_957134.2 PDZ_PDLIM-like 14..91 CDD:467235 5/28 (18%)
DUF5585 <33..>250 CDD:465521 45/215 (21%)
LIM1_Enigma 252..303 CDD:188836 24/52 (46%)
LIM2_Enigma 311..362 CDD:188840 18/50 (36%)
LIM3_Enigma 370..424 CDD:188842 27/54 (50%)
Blue background indicates that the domain is not in the aligned region.

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