DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zasp52 and pdlim5b

DIOPT Version :9

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:NP_956490.1 Gene:pdlim5b / 393165 ZFINID:ZDB-GENE-040426-908 Length:628 Species:Danio rerio


Alignment Length:847 Identity:205/847 - (24%)
Similarity:299/847 - (35%) Gaps:277/847 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1376 FPPPSPLSHLTKQGKAVQSGLHKADSIPK----YQRNWTVLPTQSPIR----------------- 1419
            |..|..:|.||..|||.::.:...|.:..    :....|.|..|:.|:                 
Zfish    25 FSMPLTISKLTDGGKAAKAKISVGDVVLSIDGIHTEGMTHLEAQNKIKACSGNLNLSLMRPSSVI 89

  Fly  1420 ---TP--EPQELRENVPLAFVDA-PKAPV--TSDSSTVHRPIAQVAAPTTVVAPSREREKERRPQ 1476
               ||  ||.|:.:.||::...| ..:||  |...:...||..........|:||     ...|:
Zfish    90 KVETPKEEPLEIIKPVPISQTPASASSPVGLTPAYNKTARPFGGATNTVRSVSPS-----PAAPK 149

  Fly  1477 LSVPIIVEDRSGPVTMAFQPLDELVRPDQALTPTRPYTPSLTNKPAPIVPFYQTEEKLVFEECSA 1541
            .|:|        ..:.||.|    ..|.|  .|.:|        |.|:....|            
Zfish   150 ASIP--------SASSAFTP----AAPSQ--QPPQP--------PFPLAGSAQ------------ 180

  Fly  1542 THARNYNELNASPFPDRTRSPAPGPPPNPLNAIRAPRMKEPETKSNILSVSGGPRLQTGSITTGQ 1606
                     .:.|.|:...|||....|.|.:. |:|                             
Zfish   181 ---------RSQPSPNSISSPASNSAPKPSSG-RSP----------------------------- 206

  Fly  1607 SYQGQLLAHSEQSSQSASQSYNQQPERITEQRVGNLNIQQREQSSQLQQQAQSQTQSQTRSQVGN 1671
                  .|:|..:|.|.|.|    |.|:|                 ....|.....:...|.|.|
Zfish   207 ------FANSSSASSSGSSS----PARVT-----------------APAPAPPPASATPHSSVYN 244

  Fly  1672 TQIERRRKVTEEFERTQSAKTIEIRTGSQSVSQSKAQSQSISQAQTQAQSQSQNQSDTERRSSYG 1736
            |.|                         ...|...|...::.|.:...:|:.:.|:.|.|:    
Zfish   245 TPI-------------------------SLYSNQNACEVAMGQRRGLMESKGEQQNGTARK---- 280

  Fly  1737 KTGFVASQAKRLSCMEEEISSLTSQSQAISARASALGEGCFPNLRSPTFDSKFPLKPAPAESIVP 1801
                        ..:|.|::.::..|.|...|           |...|            |...|
Zfish   281 ------------PVLETEVNHVSPLSDASKKR-----------LIEDT------------EDWHP 310

  Fly  1802 GYATVPAATKMLTAPPPGFLQQQQQQQQRSAFSGYQATTSSVQQSSFASSSKATTSSLSSSSASA 1866
            ...|..:.:..:.|...| .:..|.|:.|   .|.......:|.||.:|||..|   :|.|.|.|
Zfish   311 RTGTTQSRSFRILAQITG-TENDQAQESR---PGKNEAVEDLQPSSHSSSSVFT---MSKSPAGA 368

  Fly  1867 SASASVARSSQSLTQASAITTTTNNQATTAYRSSNGSITKPNLASRPSIASITAPGSASAPAPVP 1931
            :      |....::.|.|....|::.::..:..|.|:                            
Zfish   369 T------RQGNGISAAPAKHWQTSSSSSAGFPRSGGA---------------------------- 399

  Fly  1932 SAAPTKATAPFKAPIVPKSVIANAVNAAAPPAPAVFPPDLSDLNLNSNVDNSPGAGGKSAGAFGA 1996
            ..|||       .|.|.:.|.::.......|.|...|.| .|.::....::.|.           
Zfish   400 GVAPT-------GPSVGRGVSSSVPKGPERPVPQPHPRD-QDESVVQRAEHMPA----------- 445

  Fly  1997 TSAPKRGRGILNKAAGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFV 2061
                             |.|.|:|..||..|||||:.|:|:.|..|.|.|  .:||..|.|:|||
Zfish   446 -----------------GTRTPMCAHCNTVIRGPFLVAMGKSWHKDEFTC--SHCRSSLADVGFV 491

  Fly  2062 EEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDGNA 2126
            ||:|.:||..|:|::|||||.:|..||.|:.:||:.:.:|..||.|..|.:..||..|.|||...
Zfish   492 EERGSVYCVLCYEEFLAPTCFQCHKKIIGEVINALKQTWHVNCFLCASCKQPIGNNTFHLEDRQP 556

  Fly  2127 YCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKN 2191
            |||.|:..||.|.|..|.||:||||:::|||...:|..||.|..|..:||||:|::|..:|.||.
Zfish   557 YCEKDYYSLFGTGCHGCDFPIEAGDKFLEALGFTWHDTCFVCAVCSTSLEGQTFFSKKDKPLCKK 621

  Fly  2192 HA 2193
            ||
Zfish   622 HA 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_signaling 6..87 CDD:238492
DUF4749 150..>217 CDD:292558
LIM_ALP_like 282..333 CDD:188746
LIM1_Enigma_like_1 2020..2073 CDD:188839 26/52 (50%)
LIM 2081..2132 CDD:259829 21/50 (42%)
LIM3_Enigma_like_1 2140..2193 CDD:188845 25/52 (48%)
pdlim5bNP_956490.1 PDZ_signaling 11..80 CDD:238492 13/54 (24%)
DUF4749 243..335 CDD:292558 23/156 (15%)
LIM1_Enigma_like 452..503 CDD:188747 26/52 (50%)
LIM2_Enigma_like 511..562 CDD:188748 21/50 (42%)
LIM 570..624 CDD:295319 27/54 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583716
Domainoid 1 1.000 77 1.000 Domainoid score I8757
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1013114at2759
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 1 1.000 - - otm24287
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24214
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.950

Return to query results.
Submit another query.