DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp52 and ldb3b

DIOPT Version :10

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:XP_005156328.1 Gene:ldb3b / 334100 ZFINID:ZDB-GENE-030131-6032 Length:308 Species:Danio rerio


Alignment Length:194 Identity:55/194 - (28%)
Similarity:82/194 - (42%) Gaps:43/194 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQPGDAVVKINDVDVFNLRHKDAQDIVVRSGNNF 82
            |||||||||.||...|.:.::..||.:....|..||.:..|:.|....:.|.:||:.:..:....
Zfish    13 PWGFRLQGGKDFNMSLTISRITPGSKAASGNLNQGDIITAIDGVSTEGMTHLEAQNKIKAATTKL 77

  Fly    83 VITVQRGGSTWRPHVTPTG----NVPQPNSPYLQTVTKTS---------------LAHKQQDSQH 128
            .:|:||   :.||...||.    :.|.|..|:.:..|.|.               ||.|......
Zfish    78 SLTMQR---SRRPAPVPTATPRMDSPMPVIPHQKETTDTGDGEDEEQPVKKYGILLAKKPSKKSL 139

  Fly   129 IGCGYNNAARPFSNG---------------GDGGVKSIVNK--QYNTPVGIYSDESIAETLSAQ 175
            |.   |...:|..|.               |. |:|:..|:  |||:|:|:||.|::.|.:..|
Zfish   140 IP---NTEEKPQENAIHSPAKSPVPTYLPFGQ-GMKTTPNQRGQYNSPIGLYSAETLREMVMQQ 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_ZASP52-like 8..88 CDD:467281 23/69 (33%)
DUF4749 150..>218 CDD:464948 11/28 (39%)
LIM_ALP_like 282..333 CDD:188746
PHA03247 <762..1006 CDD:223021
LIM1_Enigma_like_1 2020..2073 CDD:188839
LIM 2081..2132 CDD:259829
LIM3_Enigma_like_1 2140..2193 CDD:188845
ldb3bXP_005156328.1 PDZ_PDLIM-like 5..83 CDD:467235 23/69 (33%)
DUF4749 176..275 CDD:464948 10/24 (42%)
Blue background indicates that the domain is not in the aligned region.

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