DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp52 and Prickle4

DIOPT Version :10

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:NP_001413952.1 Gene:Prickle4 / 316212 RGDID:1563979 Length:360 Species:Rattus norvegicus


Alignment Length:224 Identity:55/224 - (24%)
Similarity:81/224 - (36%) Gaps:51/224 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  2007 LNKAAGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVN-GNCRRPLQDIGFVEEKGDLYCE 2070
            :|..:..|.| |:....::.::.|..::||.. |||.....| ...|..||.:. .::..:.||.
  Rat    24 VNTDSDSGHR-PVQGYGDISVQAPTSSSLGPP-CPDISQASNWPGFRTLLQQLP-PQDSDERYCL 85

  Fly  2071 YCFEKYLAP----------------------------TCSKC------------AGKIKGDCLNA 2095
            ...|:.||.                            ||.||            |.:....|.  
  Rat    86 ALGEEELAQLRLFCAQRKQKSLGQGVARLLPPKLEGHTCEKCKKLLNPGEYGVFAARAGERCC-- 148

  Fly  2096 IGKHFHPECFTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHN 2160
                :|..||.|..||:...|..:|..||:.||.....||...:|.||. .:....|..||...:
  Rat   149 ----WHRPCFACQACGQALTNLIYFYHDGHLYCGRHHAELLRPRCPACD-QLIFSQRCTEAEGRH 208

  Fly  2161 YHSQCFNCTFCKQNLEGQSFYNKGGRPFC 2189
            :|...|.|..|.:.|:|..:...||.|.|
  Rat   209 WHENHFCCQDCAEPLDGGRYALPGGSPCC 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_ZASP52-like 8..88 CDD:467281
DUF4749 150..>218 CDD:464948
LIM_ALP_like 282..333 CDD:188746
PHA03247 <762..1006 CDD:223021
LIM1_Enigma_like_1 2020..2073 CDD:188839 12/53 (23%)
LIM 2081..2132 CDD:259829 17/62 (27%)
LIM3_Enigma_like_1 2140..2193 CDD:188845 16/50 (32%)
Prickle4NP_001413952.1 None
Blue background indicates that the domain is not in the aligned region.

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