DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zasp52 and hoxb8a

DIOPT Version :9

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:XP_005171620.1 Gene:hoxb8a / 30343 ZFINID:ZDB-GENE-990415-108 Length:246 Species:Danio rerio


Alignment Length:213 Identity:44/213 - (20%)
Similarity:87/213 - (40%) Gaps:47/213 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  1075 EELGIRP-------------EPPQSVEYY----ETRRDQPRKSSAFAAMQAFQPSR----EPLSS 1118
            ::||.||             ..||..|:|    .|....|.:.|..|.....:|..    :.|..
Zfish    30 QDLGTRPTVVYGPGTGATFQHAPQIQEFYHHGASTLSAAPYQQSPCAVTCHGEPGNFYGYDALQR 94

  Fly  1119 NTVSNAGSVADTPRAS----IVSALKEETDLEYQK--------YLKAQ-----QRNQKRLDYFHQ 1166
            .|:..|.. ||..:.|    ....:.:|||...|.        :::.|     :|.::....:..
Zfish    95 QTLFGAQD-ADLVQYSDCKLATGGIGDETDNTEQSPSPTQLFPWMRPQVAAGRRRGRQTYSRYQT 158

  Fly  1167 KEEELSGLQGQQLTQLQR-ELSNQQQNLLSQQQLQQSKLLQLQQCVQSQELQQQVQHLTQKSQQQ 1230
            .|.|...|....||:.:| |:|:...  |:::|:   |:....:.::.::...:.:..:.||:|:
Zfish   159 LELEKEFLFNPYLTRKRRIEVSHALG--LTERQV---KIWFQNRRMKWKKENNKDKFPSSKSEQE 218

  Fly  1231 PPQANQQQQQQQQQRGTQ 1248
              |..:::::::|..|||
Zfish   219 --QIEKEKREKEQASGTQ 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_signaling 6..87 CDD:238492
DUF4749 150..>217 CDD:292558
LIM_ALP_like 282..333 CDD:188746
LIM1_Enigma_like_1 2020..2073 CDD:188839
LIM 2081..2132 CDD:259829
LIM3_Enigma_like_1 2140..2193 CDD:188845
hoxb8aXP_005171620.1 Homeobox 150..202 CDD:278475 11/56 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6207
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

Return to query results.
Submit another query.