DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp52 and Lpxn

DIOPT Version :9

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:XP_038964643.1 Gene:Lpxn / 293783 RGDID:1304981 Length:398 Species:Rattus norvegicus


Alignment Length:307 Identity:88/307 - (28%)
Similarity:127/307 - (41%) Gaps:55/307 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  1921 PGSASAPAPVPSAAPTKA-TAPFKAPIVPKSVI--ANAVNAAAPPAPAVFPP------DLSDL-- 1974
            |...|.....|....|:. |:|.|..:|..:.|  .|..:....|..:|.||      .|.:|  
  Rat    46 PTQESKLPQTPKTLSTQGNTSPLKVQLVYTTNIQEPNVYSEVQEPKQSVLPPKTSAAAQLDELMA 110

  Fly  1975 NLN------------------------SNVDNSPGAGGKSAGAFGATSAPKRGRGILNKAAGPGV 2015
            :||                        :::|:..|...:.....|..:.|| |.           
  Rat   111 HLNELQAKVSVKADASRKPLPDKQDHKASLDSMLGGLEQELQDLGIATVPK-GH----------- 163

  Fly  2016 RIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFEKYLAPT 2080
                |.||...|.|..|.|||:.|.|:||:|.  :|:..|....|.|..|..||...:....:|.
  Rat   164 ----CASCQKPIAGKVIHALGQSWHPEHFVCT--HCKEELGSSPFFERNGLAYCSKDYHHLFSPR 222

  Fly  2081 CSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGF 2145
            |:.||..|....|.|:.|.:|||.|.|..||::||...|..:|...||..|:..:|:.||..|..
  Rat   223 CAYCAAPITDKVLTAMNKTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCGGCNR 287

  Fly  2146 PVEAGDRWVEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNH 2192
            ||.  :.::.|:|..:|.:||.|..|..:....||:...|||||:.|
  Rat   288 PVL--ENYLSAMNTVWHPECFVCGDCFSSFSSGSFFELDGRPFCELH 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_signaling 6..87 CDD:238492
DUF4749 150..>217 CDD:292558
LIM_ALP_like 282..333 CDD:188746
LIM1_Enigma_like_1 2020..2073 CDD:188839 21/52 (40%)
LIM 2081..2132 CDD:259829 20/50 (40%)
LIM3_Enigma_like_1 2140..2193 CDD:188845 19/53 (36%)
LpxnXP_038964643.1 LIM1_Leupaxin 162..216 CDD:188790 22/70 (31%)
LIM 223..274 CDD:413332 20/50 (40%)
LIM 282..334 CDD:413332 19/53 (36%)
LIM4_Paxillin_like 341..392 CDD:188725
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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