DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp52 and Pdlim2

DIOPT Version :10

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:XP_063130209.1 Gene:Pdlim2 / 290354 RGDID:1359203 Length:386 Species:Rattus norvegicus


Alignment Length:370 Identity:88/370 - (23%)
Similarity:154/370 - (41%) Gaps:97/370 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQPGDAVVKINDVDVFNLRHKDAQDIVVRSGNNF 82
            |||||:.||.||..|::|.||.....:|.|.|:|||.:|.||.....::.|.:||..:.:|.:..
  Rat    50 PWGFRISGGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGESAESMLHAEAQSKIRQSASPL 114

  Fly    83 VITVQRG-----------GS----------TWRPH-----------VTPTGNVPQPNSPYLQTVT 115
            .:.:.|.           ||          :.|.|           .:|....|:|:||:.....
  Rat   115 RLQLDRSQTASPGQINGEGSLDMLATRFQGSLRTHHNSQSSQRSACFSPASLSPRPDSPFSTPPP 179

  Fly   116 KTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKSIVNKQY-----------NTPVGIYSDESIA 169
            .:.:|...::.  |||.:.:...      ..|:.:..:..|           ::|    ||.::.
  Rat   180 TSPIALSGENV--IGCSFQSLTH------SPGLAATHHLTYPGQPTSQQAGHSSP----SDSTVR 232

  Fly   170 ETLSAQAEVLAGGVLGVNFKKNEKEYQGDRSEVLKFLREEETGQSTPAFGNSHYEHDAPQQLQQP 234
            ..|.:.... :...|.::.:::        |||.|.|:|...|::.|...:|.      :.||: 
  Rat   233 VLLHSPGRP-SSPRLSLDLEED--------SEVFKMLQENRQGRAAPRQSSSF------RLLQE- 281

  Fly   235 QQQYNQHQQHYHQQQQQQQSSTTRHVSAPVNSPKPPSTGGLPTGQ--------NICTECERLITG 291
                        ..:.:::..|...|.:.: |||    ..|||.:        :.|.:|...|:.
  Rat   282 ------------ALEAEERGGTPAFVPSSL-SPK----ASLPTSRALATPPKLHTCEKCSVNISN 329

  Fly   292 VFVRIKD-KNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQ 335
            ..|||:: :..|..|:.||.||.:||.:|::...|:|||:.||:|
  Rat   330 QAVRIQEGRYRHPGCYTCADCGLNLKMRGHFWVGNELYCEKHARQ 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_ZASP52-like 8..88 CDD:467281 26/69 (38%)
DUF4749 150..>218 CDD:464948 14/78 (18%)
LIM_ALP_like 282..333 CDD:188746 19/51 (37%)
PHA03247 <762..1006 CDD:223021
LIM1_Enigma_like_1 2020..2073 CDD:188839
LIM 2081..2132 CDD:259829
LIM3_Enigma_like_1 2140..2193 CDD:188845
Pdlim2XP_063130209.1 None
Blue background indicates that the domain is not in the aligned region.

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